Genomic evidence of geographically widespread effect of gene flow from polar bears into brown bears

por Cahill, James A, Stirling, Ian, Kistler, Logan, Salamzade, Rauf, Ersmark, Erik, Fulton, Tara L, Stiller, Mathias, Green, Richard E, Shapiro, Beth
Publicado 2015

Ancient DNA Resolves the History of Tetragnatha (Araneae, Tetragnathidae) Spiders on Rapa Nui

por Cotoras, Darko D., Murray, Gemma G. R., Kapp, Joshua, Gillespie, Rosemary G., Griswold, Charles, Simison, W. Brian, Green, Richard E., Shapiro, Beth
Publicado 2017

A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos

por Troll, Christopher J., Kapp, Joshua, Rao, Varsha, Harkins, Kelly M., Cole, Charles, Naughton, Colin, Morgan, Jessica M., Shapiro, Beth, Green, Richard E.
Publicado 2019

One fly–one genome: chromosome-scale genome assembly of a single outbred Drosophila melanogaster

por Adams, Matthew, McBroome, Jakob, Maurer, Nicholas, Pepper-Tunick, Evan, Saremi, Nedda F, Green, Richard E, Vollmers, Christopher, Corbett-Detig, Russell B
Publicado 2020

Analysis of Human Accelerated DNA Regions Using Archaic Hominin Genomes

por Burbano, Hernán A., Green, Richard E., Maricic, Tomislav, Lalueza-Fox, Carles, de la Rasilla, Marco, Rosas, Antonio, Kelso, Janet, Pollard, Katherine S., Lachmann, Michael, Pääbo, Svante
Publicado 2012

An Annotated Draft Genome for the Andean Bear, Tremarctos ornatus

por Saremi, Nedda F, Oppenheimer, Jonas, Vollmers, Christopher, O’Connell, Brendan, Milne, Shard A, Byrne, Ashley, Yu, Li, Ryder, Oliver A, Green, Richard E, Shapiro, Beth
Publicado 2021

Genomic Evidence for Island Population Conversion Resolves Conflicting Theories of Polar Bear Evolution

por Cahill, James A., Green, Richard E., Fulton, Tara L., Stiller, Mathias, Jay, Flora, Ovsyanikov, Nikita, Salamzade, Rauf, St. John, John, Stirling, Ian, Slatkin, Montgomery, Shapiro, Beth
Publicado 2013

Epigenetic maintenance of topological domains in the highly rearranged gibbon genome

por Lazar, Nathan H., Nevonen, Kimberly A., O'Connell, Brendan, McCann, Christine, O'Neill, Rachel J., Green, Richard E., Meyer, Thomas J., Okhovat, Mariam, Carbone, Lucia
Publicado 2018

Genome-Wide Identification of Alternative Splice Forms Down-Regulated by Nonsense-Mediated mRNA Decay in Drosophila

por Hansen, Kasper Daniel, Lareau, Liana F., Blanchette, Marco, Green, Richard E., Meng, Qi, Rehwinkel, Jan, Gallusser, Fabian L., Izaurralde, Elisa, Rio, Donald C., Dudoit, Sandrine, Brenner, Steven E.
Publicado 2009

Genome Sequencing of a Gray Wolf from Peninsular India Provides New Insights into the Evolution and Hybridization of Gray Wolves

por Wang, Ming-Shan, Thakur, Mukesh, Jhala, Yadvendradev, Wang, Sheng, Srinivas, Yellapu, Dai, Shan-Shan, Liu, Zheng-Xi, Chen, Hong-Man, Green, Richard E, Koepfli, Klaus-Peter, Shapiro, Beth
Publicado 2022

A High-Quality Reference Genome Assembly of the Saltwater Crocodile, Crocodylus porosus, Reveals Patterns of Selection in Crocodylidae

por Ghosh, Arnab, Johnson, Matthew G, Osmanski, Austin B, Louha, Swarnali, Bayona-Vásquez, Natalia J, Glenn, Travis C, Gongora, Jaime, Green, Richard E, Isberg, Sally, Stevens, Richard D, Ray, David A
Publicado 2019

Deeply conserved synteny and the evolution of metazoan chromosomes

por Simakov, Oleg, Bredeson, Jessen, Berkoff, Kodiak, Marletaz, Ferdinand, Mitros, Therese, Schultz, Darrin T., O’Connell, Brendan L., Dear, Paul, Martinez, Daniel E., Steele, Robert E., Green, Richard E., David, Charles N., Rokhsar, Daniel S.
Publicado 2022

Whole-genome sequence and assembly of the Javan gibbon (Hylobates moloch)

por Escalona, Merly, VanCampen, Jake, Maurer, Nicholas W, Haukness, Marina, Okhovat, Mariam, Harris, Robert S, Watwood, Allison, Hartley, Gabrielle A, O’Neill, Rachel J, Medvedev, Paul, Makova, Kateryna D, Vollmers, Christopher, Carbone, Lucia, Green, Richard E
Publicado 2022

Chromosome-scale shotgun assembly using an in vitro method for long-range linkage

por Putnam, Nicholas H., O'Connell, Brendan L., Stites, Jonathan C., Rice, Brandon J., Blanchette, Marco, Calef, Robert, Troll, Christopher J., Fields, Andrew, Hartley, Paul D., Sugnet, Charles W., Haussler, David, Rokhsar, Daniel S., Green, Richard E.
Publicado 2016

Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids

por Seiler, Spencer T., Mantalas, Gary L., Selberg, John, Cordero, Sergio, Torres-Montoya, Sebastian, Baudin, Pierre V., Ly, Victoria T., Amend, Finn, Tran, Liam, Hoffman, Ryan N., Rolandi, Marco, Green, Richard E., Haussler, David, Salama, Sofie R., Teodorescu, Mircea
Publicado 2022

Deeply conserved synteny resolves early events in vertebrate evolution

por Simakov, Oleg, Marlétaz, Ferdinand, Yue, Jia-Xing, O’Connell, Brendan, Jenkins, Jerry, Brandt, Alexander, Calef, Robert, Tung, Che-Huang, Huang, Tzu-Kai, Schmutz, Jeremy, Satoh, Nori, Yu, Jr-Kai, Putnam, Nicholas H., Green, Richard E., Rokhsar, Daniel S.
Publicado 2020

Multiple Lineages of Ancient CR1 Retroposons Shaped the Early Genome Evolution of Amniotes

por Suh, Alexander, Churakov, Gennady, Ramakodi, Meganathan P., Platt, Roy N., Jurka, Jerzy, Kojima, Kenji K., Caballero, Juan, Smit, Arian F., Vliet, Kent A., Hoffmann, Federico G., Brosius, Jürgen, Green, Richard E., Braun, Edward L., Ray, David A., Schmitz, Jürgen
Publicado 2014

Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle

por Rice, Edward S, Koren, Sergey, Rhie, Arang, Heaton, Michael P, Kalbfleisch, Theodore S, Hardy, Timothy, Hackett, Peter H, Bickhart, Derek M, Rosen, Benjamin D, Ley, Brian Vander, Maurer, Nicholas W, Green, Richard E, Phillippy, Adam M, Petersen, Jessica L, Smith, Timothy P L
Publicado 2020

A Reference Genome Assembly of American Bison, Bison bison bison

por Oppenheimer, Jonas, Rosen, Benjamin D, Heaton, Michael P, Vander Ley, Brian L, Shafer, Wade R, Schuetze, Fred T, Stroud, Brad, Kuehn, Larry A, McClure, Jennifer C, Barfield, Jennifer P, Blackburn, Harvey D, Kalbfleisch, Theodore S, Bickhart, Derek M, Davenport, Kimberly M, Kuhn, Kristen L, Green, Richard E, Shapiro, Beth, Smith, Timothy P L
Publicado 2021

Improved genome assembly of American alligator genome reveals conserved architecture of estrogen signaling

por Rice, Edward S., Kohno, Satomi, John, John St., Pham, Son, Howard, Jonathan, Lareau, Liana F., O'Connell, Brendan L., Hickey, Glenn, Armstrong, Joel, Deran, Alden, Fiddes, Ian, Platt, Roy N., Gresham, Cathy, McCarthy, Fiona, Kern, Colin, Haan, David, Phan, Tan, Schmidt, Carl, Sanford, Jeremy R., Ray, David A., Paten, Benedict, Guillette, Louis J., Green, Richard E.
Publicado 2017