Fine-grained cell-type specific association studies with human bulk brain data using a large single-nucleus RNA sequencing based reference panel

por van den Oord, Edwin J. C. G., Aberg, Karolina A.
Publicado 2023

A method to improve the reproducibility of findings from epigenome- and transcriptome-wide association studies

por van den Oord, Edwin JCG, Guintivano, Jerry D, Aberg, Karolina A.
Publicado 2023

A targeted solution for estimating the cell-type composition of bulk samples

por van den Oord, Edwin J. C. G., Xie, Lin Y., Tran, Charles J., Zhao, Min, Aberg, Karolina A.
Publicado 2021

Estimation of CpG coverage in whole methylome next-generation sequencing studies

por van den Oord, Edwin JCG, Bukszar, Jozsef, Rudolf, Gábor, Nerella, Srilaxmi, McClay, Joseph L, Xie, Lin Y, Aberg, Karolina A
Publicado 2013

High quality methylome-wide investigations through next-generation sequencing of DNA from a single archived dry blood spot

por Aberg, Karolina A., Xie, Lin Y., Nerella, Srilaxmi, Copeland, William E., Costello, E. Jane, van den Oord, Edwin J.C.G.
Publicado 2013

An integrative study of five biological clocks in somatic and mental health

por Jansen, Rick, Han, Laura KM, Verhoeven, Josine E, Aberg, Karolina A, van den Oord, Edwin CGJ, Milaneschi, Yuri, Penninx, Brenda WJH
Publicado 2021

MethylPCA: a toolkit to control for confounders in methylome-wide association studies

por Chen, Wenan, Gao, Guimin, Nerella, Srilaxmi, Hultman, Christina M, Magnusson, Patrik KE, Sullivan, Patrick F, Aberg, Karolina A, van den Oord, Edwin JCG
Publicado 2013

Transcriptome-wide association study for postpartum depression implicates altered B-cell activation and insulin resistance

por Guintivano, Jerry, Aberg, Karolina A., Clark, Shaunna L., Rubinow, David R., Sullivan, Patrick F., Meltzer-Brody, Samantha, van den Oord, Edwin J. C. G.
Publicado 2022

Evaluation of Methyl-Binding Domain Based Enrichment Approaches Revisited

por Aberg, Karolina A., Xie, Linying, Chan, Robin F., Zhao, Min, Pandey, Ashutosh K., Kumar, Gaurav, Clark, Shaunna L., van den Oord, Edwin J. C. G.
Publicado 2015

Association of Childhood Trauma Exposure With Adult Psychiatric Disorders and Functional Outcomes

por Copeland, William E., Shanahan, Lilly, Hinesley, Jennifer, Chan, Robin F., Aberg, Karolina A., Fairbank, John A., van den Oord, Edwin J. C. G., Costello, E. Jane
Publicado 2018

The genomics of major psychiatric disorders in a large pedigree from Northern Sweden

por Szatkiewicz, Jin, Crowley, James J., Adolfsson, Annelie Nordin, Åberg, Karolina A., Alaerts, Maaike, Genovese, Giulio, McCarroll, Steven, Del-Favero, Jurgen, Adolfsson, Rolf, Sullivan, Patrick F.
Publicado 2019

Test-statistic inflation in methylome-wide association studies

por Guintivano, Jerry, Shabalin, Andrey A, Chan, Robin F., Rubinow, David R., Sullivan, Patrick F., Meltzer-Brody, Samantha, Aberg, Karolina a, van den Oord, Edwin J. C. G.
Publicado 2020

Enrichment methods provide a feasible approach to comprehensive and adequately powered investigations of the brain methylome

por Chan, Robin F., Shabalin, Andrey A., Xie, Lin Y., Adkins, Daniel E., Zhao, Min, Turecki, Gustavo, Clark, Shaunna L., Aberg, Karolina A., van den Oord, Edwin J.C.G.
Publicado 2017

Convergence of evidence from a methylome-wide CpG-SNP association study and GWAS of major depressive disorder

por Aberg, Karolina A., Shabalin, Andrey A., Chan, Robin F., Zhao, Min, Kumar, Gaurav, van Grootheest, Gerard, Clark, Shaunna L., Xie, Lin Y., Milaneschi, Yuri, Penninx, Brenda W. J. H., van den Oord, Edwin J. C. G.
Publicado 2018

A methylation study of long term depression risk

por Clark, Shaunna L, Hattab, Mohammad W, Chan, Robin F, Shabalin, Andrey A, Han, Laura KM, Zhao, Min, Smit, Johannes H, Jansen, Rick, Milaneschi, Yuri, Xie, Lin Ying, van Grootheest, Gerard, Penninx, Brenda WJH, Aberg, Karolina A, van den Oord, Edwin JCG
Publicado 2019

High density methylation QTL analysis in human blood via next-generation sequencing of the methylated genomic DNA fraction

por McClay, Joseph L., Shabalin, Andrey A., Dozmorov, Mikhail G., Adkins, Daniel E., Kumar, Gaurav, Nerella, Srilaxmi, Clark, Shaunna L., Bergen, Sarah E., Hultman, Christina M., Magnusson, Patrik K. E., Sullivan, Patrick F., Aberg, Karolina A., van den Oord, Edwin J. C. G.
Publicado 2015

Methylome-wide association findings for major depressive disorder overlap in blood and brain and replicate in independent brain samples

por Aberg, Karolina A., Dean, Brian, Shabalin, Andrey A., Chan, Robin F., Han, Laura K.M., Zhao, Min, van Grootheest, Gerard, Xie, Lin Y., Milaneschi, Yuri, Clark, Shaunna L., Turecki, Gustavo, Penninx, Brenda W.J.H., van den Oord, Edwin J.C.G.
Publicado 2018

Correcting for cell-type effects in DNA methylation studies: reference-based method outperforms latent variable approaches in empirical studies

por Hattab, Mohammad W., Shabalin, Andrey A., Clark, Shaunna L., Zhao, Min, Kumar, Gaurav, Chan, Robin F., Xie, Lin Ying, Jansen, Rick, Han, Laura K. M., Magnusson, Patrik K. E., van Grootheest, Gerard, Hultman, Christina M., Penninx, Brenda W. J. H., Aberg, Karolina A., van den Oord, Edwin J. C. G.
Publicado 2017