MTSplice predicts effects of genetic variants on tissue-specific splicing

por Cheng, Jun, Çelik, Muhammed Hasan, Kundaje, Anshul, Gagneur, Julien
Publicado 2021

Publisher Correction: MTSplice predicts effects of genetic variants on tissue-specific splicing

por Cheng, Jun, Çelik, Muhammed Hasan, Kundaje, Anshul, Gagneur, Julien
Publicado 2021

MMSplice: modular modeling improves the predictions of genetic variant effects on splicing

por Cheng, Jun, Nguyen, Thi Yen Duong, Cygan, Kamil J., Çelik, Muhammed Hasan, Fairbrother, William G., Avsec, žiga, Gagneur, Julien
Publicado 2019

The ENCODE4 long-read RNA-seq collection reveals distinct classes of transcript structure diversity

por Reese, Fairlie, Williams, Brian, Balderrama-Gutierrez, Gabriela, Wyman, Dana, Çelik, Muhammed Hasan, Rebboah, Elisabeth, Rezaie, Narges, Trout, Diane, Razavi-Mohseni, Milad, Jiang, Yunzhe, Borsari, Beatrice, Morabito, Samuel, Liang, Heidi Yahan, McGill, Cassandra J., Rahmanian, Sorena, Sakr, Jasmine, Jiang, Shan, Zeng, Weihua, Carvalho, Klebea, Weimer, Annika K., Dionne, Louise A., McShane, Ariel, Bedi, Karan, Elhajjajy, Shaimae I., Upchurch, Sean, Jou, Jennifer, Youngworth, Ingrid, Gabdank, Idan, Sud, Paul, Jolanki, Otto, Strattan, J. Seth, Kagda, Meenakshi S., Snyder, Michael P., Hitz, Ben C., Moore, Jill E., Weng, Zhiping, Bennett, David, Reinholdt, Laura, Ljungman, Mats, Beer, Michael A., Gerstein, Mark B., Pachter, Lior, Guigó, Roderic, Wold, Barbara J., Mortazavi, Ali
Publicado 2023