Flow Cytometry Bioinformatics

por O'Neill, Kieran, Aghaeepour, Nima, Špidlen, Josef, Brinkman, Ryan
Publicado 2013

Flow cytometry data standards

por Spidlen, Josef, Shooshtari, Parisa, Kollmann, Tobias R, Brinkman, Ryan R
Publicado 2011

Automated optimized parameters for T-distributed stochastic neighbor embedding improve visualization and analysis of large datasets

por Belkina, Anna C., Ciccolella, Christopher O., Anno, Rina, Halpert, Richard, Spidlen, Josef, Snyder-Cappione, Jennifer E.
Publicado 2019

flowCore: a Bioconductor package for high throughput flow cytometry

por Hahne, Florian, LeMeur, Nolwenn, Brinkman, Ryan R, Ellis, Byron, Haaland, Perry, Sarkar, Deepayan, Spidlen, Josef, Strain, Errol, Gentleman, Robert
Publicado 2009

FuGEFlow: data model and markup language for flow cytometry

por Qian, Yu, Tchuvatkina, Olga, Spidlen, Josef, Wilkinson, Peter, Gasparetto, Maura, Jones, Andrew R, Manion, Frank J, Scheuermann, Richard H, Sekaly, Rafick-Pierre, Brinkman, Ryan R
Publicado 2009

AutoSpill is a principled framework that simplifies the analysis of multichromatic flow cytometry data

por Roca, Carlos P., Burton, Oliver T., Gergelits, Václav, Prezzemolo, Teresa, Whyte, Carly E., Halpert, Richard, Kreft, Łukasz, Collier, James, Botzki, Alexander, Spidlen, Josef, Humblet-Baron, Stéphanie, Liston, Adrian
Publicado 2021

GenePattern flow cytometry suite

por Spidlen, Josef, Barsky, Aaron, Breuer, Karin, Carr, Peter, Nazaire, Marc-Danie, Hill, Barbara Allen, Qian, Yu, Liefeld, Ted, Reich, Michael, Mesirov, Jill P, Wilkinson, Peter, Scheuermann, Richard H, Sekaly, Rafick-Pierre, Brinkman, Ryan R
Publicado 2013