Bridging the Gap between Gut Microbiota and Alzheimer’s Disease: A Metaproteomic Approach for Biomarker Discovery in Transgenic Mice

por Ayan, Esra, DeMirci, Hasan, Serdar, Muhittin Abdulkadir, Palermo, Francesca, Baykal, Ahmet Tarık
Publicado 2023

Structural insights into bifunctional thaumarchaeal crotonyl-CoA hydratase and 3-hydroxypropionyl-CoA dehydratase from Nitrosopumilus maritimus

por Destan, Ebru, Yuksel, Busra, Tolar, Bradley B., Ayan, Esra, Deutsch, Sam, Yoshikuni, Yasuo, Wakatsuki, Soichi, Francis, Christopher A., DeMirci, Hasan
Publicado 2021

Identification of New L-Heptanoylphosphatidyl Inositol Pentakisphosphate Derivatives Targeting the Interaction with HIV-1 Gag by Molecular Modelling Studies

por Ciftci, Halilibrahim, Sever, Belgin, Ayan, Esra, Can, Mustafa, DeMirci, Hasan, Otsuka, Masami, TuYuN, Amaç Fatih, Tateishi, Hiroshi, Fujita, Mikako
Publicado 2022

Protocol for structure determination of SARS-CoV-2 main protease at near-physiological-temperature by serial femtosecond crystallography

por Ertem, Fatma Betul, Guven, Omur, Buyukdag, Cengizhan, Gocenler, Oktay, Ayan, Esra, Yuksel, Busra, Gul, Mehmet, Usta, Gozde, Cakılkaya, Barıs, Johnson, J. Austin, Dao, E. Han, Su, Zhen, Poitevin, Frederic, Yoon, Chun Hong, Kupitz, Christopher, Hayes, Brandon, Liang, Mengning, Hunter, Mark S., Batyuk, Alexander, Sierra, Raymond G., Ketawala, Gihan, Botha, Sabine, Dağ, Çağdaş, DeMirci, Hasan
Publicado 2022

Structural insight into host plasma membrane association and assembly of HIV-1 matrix protein

por Ciftci, Halilibrahim, Tateishi, Hiroshi, Koiwai, Kotaro, Koga, Ryoko, Anraku, Kensaku, Monde, Kazuaki, Dağ, Çağdaş, Destan, Ebru, Yuksel, Busra, Ayan, Esra, Yildirim, Gunseli, Yigin, Merve, Ertem, F. Betul, Shafiei, Alaleh, Guven, Omur, Besler, Sabri O., Sierra, Raymond G., Yoon, Chun Hong, Su, Zhen, Liang, Mengling, Acar, Burcin, Haliloglu, Turkan, Otsuka, Masami, Yumoto, Fumiaki, Fujita, Mikako, Senda, Toshiya, DeMirci, Hasan
Publicado 2021

Cooperative allostery and structural dynamics of streptavidin at cryogenic- and ambient-temperature

por Ayan, Esra, Yuksel, Busra, Destan, Ebru, Ertem, Fatma Betul, Yildirim, Gunseli, Eren, Meryem, Yefanov, Oleksandr M., Barty, Anton, Tolstikova, Alexandra, Ketawala, Gihan K., Botha, Sabine, Dao, E. Han, Hayes, Brandon, Liang, Mengning, Seaberg, Matthew H., Hunter, Mark S., Batyuk, Alexander, Mariani, Valerio, Su, Zhen, Poitevin, Frederic, Yoon, Chun Hong, Kupitz, Christopher, Cohen, Aina, Doukov, Tzanko, Sierra, Raymond G., Dağ, Çağdaş, DeMirci, Hasan
Publicado 2022

Rapid and efficient ambient temperature X-ray crystal structure determination at Turkish Light Source

por Gul, Mehmet, Ayan, Esra, Destan, Ebru, Johnson, J. Austin, Shafiei, Alaleh, Kepceoğlu, Abdullah, Yilmaz, Merve, Ertem, Fatma Betül, Yapici, İlkin, Tosun, Bilge, Baldir, Nilüfer, Tokay, Nurettin, Nergiz, Zeliş, Karakadioğlu, Gözde, Paydos, Seyide Seda, Kulakman, Cahine, Ferah, Cengiz Kaan, Güven, Ömür, Atalay, Necati, Akcan, Enver Kamil, Cetinok, Haluk, Arslan, Nazlı Eylül, Şabanoğlu, Kardelen, Aşci, Bengisu, Tavli, Serra, Gümüsboğa, Helin, Altuntaş, Sevde, Otsuka, Masami, Fujita, Mikako, Teki̇n, Şaban, Çi̇ftçi̇, Halilibrahim, Durdaği, Serdar, Karaca, Ezgi, Kaplan Türköz, Burcu, Kabasakal, Burak Veli, Kati, Ahmet, DeMi̇rci̇, Hasan
Publicado 2023

Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight”

por ATALAY, Necati, AKCAN, Enver Kamil, GÜL, Mehmet, AYAN, Esra, DESTAN, Ebru, ERTEM, Fatma Betül, TOKAY, Nurettin, ÇAKILKAYA, Barış, NERGİZ, Zeliş, KARAKADIOĞLU, Gözde, KEPCEOĞLU, Abdullah, YAPICI, İlkin, TOSUN, Bilge, BALDIR, Nilüfer, YILDIRIM, Günseli, JOHNSON, J Austin, GÜVEN, Ömür, SHAFIEI, Alaleh, ARSLAN, Nazlı Eylül, YILMAZ, Merve, KULAKMAN, Cahine, PAYDOS, Seyide Seda, ÇİNAL, Zeynep Sena, ŞABANOĞLU, Kardelen, PAZARÇEVİREN, Ayşegül, YILMAZ, Ayşenur, CANBAY, Başak, AŞCI, Bengisu, KARTAL, Esra, TAVLI, Serra, ÇALISEKİ, Mehmet, GÖÇ, Günce, MERMER, Arif, YEŞİLAY, Gamze, ALTUNTAŞ, Sevde, TATEISHI, Hiroshi, OTSUKA, Masami, FUJITA, Mikako, TEKİN, Şaban, ÇİFTÇİ, Halilibrahim, DURDAĞI, Serdar, DİNLER DOĞANAY, Gizem, KARACA, Ezgi, KAPLAN TÜRKÖZ, Burcu, KABASAKAL, Burak Veli, KATI, Ahmet, DEMİRCİ, Hasan
Publicado 2023

Near-physiological-temperature serial crystallography reveals conformations of SARS-CoV-2 main protease active site for improved drug repurposing

por Durdagi, Serdar, Dağ, Çağdaş, Dogan, Berna, Yigin, Merve, Avsar, Timucin, Buyukdag, Cengizhan, Erol, Ismail, Ertem, Fatma Betul, Calis, Seyma, Yildirim, Gunseli, Orhan, Muge D., Guven, Omur, Aksoydan, Busecan, Destan, Ebru, Sahin, Kader, Besler, Sabri O., Oktay, Lalehan, Shafiei, Alaleh, Tolu, Ilayda, Ayan, Esra, Yuksel, Busra, Peksen, Ayse B., Gocenler, Oktay, Yucel, Ali D., Can, Ozgur, Ozabrahamyan, Serena, Olkan, Alpsu, Erdemoglu, Ece, Aksit, Fulya, Tanisali, Gokhan, Yefanov, Oleksandr M., Barty, Anton, Tolstikova, Alexandra, Ketawala, Gihan K., Botha, Sabine, Dao, E. Han, Hayes, Brandon, Liang, Mengning, Seaberg, Matthew H., Hunter, Mark S., Batyuk, Alex, Mariani, Valerio, Su, Zhen, Poitevin, Frederic, Yoon, Chun Hong, Kupitz, Christopher, Sierra, Raymond G., Snell, Edward H., DeMirci, Hasan
Publicado 2021