The multilocus sequence typing network: mlst.net

por Aanensen, David M., Spratt, Brian G.
Publicado 2005

Genomic population structures of microbial pathogens

por Holt, Kathryn E., Aanensen, David M., Achtman, Mark
Publicado 2022

Deep clustering of bacterial tree images

por Hayati, Maryam, Chindelevitch, Leonid, Aanensen, David, Colijn, Caroline
Publicado 2022

Hierarchical and Spatially Explicit Clustering of DNA Sequences with BAPS Software

por Cheng, Lu, Connor, Thomas R., Sirén, Jukka, Aanensen, David M., Corander, Jukka
Publicado 2013

Bayesian semi-supervised classification of bacterial samples using MLST databases

por Cheng, Lu, Connor, Thomas R, Aanensen, David M, Spratt, Brian G, Corander, Jukka
Publicado 2011

EpiCollect+: linking smartphones to web applications for complex data collection projects

por Aanensen, David M., Huntley, Derek M., Menegazzo, Mirko, Powell, Chris I., Spratt, Brian G.
Publicado 2014

Implementing Whole-Genome Sequencing for Ongoing Surveillance of Antimicrobial Resistance: Exemplifying Insights Into Klebsiella pneumoniae

por Aanensen, David M, Carlos, Celia C, Donado-Godoy, Pilar, Okeke, Iruka N, Ravikumar, K L
Publicado 2021

Phylogenetic and phylodynamic approaches to understanding and combating the early SARS-CoV-2 pandemic

por Attwood, Stephen W., Hill, Sarah C., Aanensen, David M., Connor, Thomas R., Pybus, Oliver G.
Publicado 2022

EpiCollect: Linking Smartphones to Web Applications for Epidemiology, Ecology and Community Data Collection

por Aanensen, David M., Huntley, Derek M., Feil, Edward J., al-Own, Fada'a, Spratt, Brian G.
Publicado 2009

Phandango: an interactive viewer for bacterial population genomics

por Hadfield, James, Croucher, Nicholas J, Goater, Richard J, Abudahab, Khalil, Aanensen, David M, Harris, Simon R
Publicado 2018

Assigning strains to bacterial species via the internet

por Bishop, Cynthia J, Aanensen, David M, Jordan, Gregory E, Kilian, Mogens, Hanage, William P, Spratt, Brian G
Publicado 2009

Train-the-Trainer as an Effective Approach to Building Global Networks of Experts in Genomic Surveillance of Antimicrobial Resistance (AMR)

por Abrudan, Monica, Matimba, Alice, Nikolic, Dusanka, Hughes, Darren, Argimón, Silvia, Kekre, Mihir, Underwood, Anthony, Aanensen, David M
Publicado 2021

Geographic Distribution of Staphylococcus aureus Causing Invasive Infections in Europe: A Molecular-Epidemiological Analysis

por Grundmann, Hajo, Aanensen, David M., van den Wijngaard, Cees C., Spratt, Brian G., Harmsen, Dag, Friedrich, Alexander W.
Publicado 2010

PANINI: Pangenome Neighbour Identification for Bacterial Populations

por Abudahab, Khalil, Prada, Joaquín M., Yang, Zhirong, Bentley, Stephen D., Croucher, Nicholas J., Corander, Jukka, Aanensen, David M.
Publicado 2018

The Promise of Whole Genome Pathogen Sequencing for the Molecular Epidemiology of Emerging Aquaculture Pathogens

por Bayliss, Sion C., Verner-Jeffreys, David W., Bartie, Kerry L., Aanensen, David M., Sheppard, Samuel K., Adams, Alexandra, Feil, Edward J.
Publicado 2017

Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris

por Rhodes, Johanna, Abdolrasouli, Alireza, Farrer, Rhys A., Cuomo, Christina A., Aanensen, David M., Armstrong-James, Darius, Fisher, Matthew C., Schelenz, Silke
Publicado 2018

Genomic Epidemiology of CC30 Methicillin-Resistant Staphylococcus aureus Strains from Argentina Reveals Four Major Clades with Distinctive Genetic Features

por Di Gregorio, Sabrina, Haim, María Sol, Vielma Vallenilla, Jesús, Cohen, Victoria, Rago, Lucía, Gulone, Lucía, Aanensen, David M., Argimón, Silvia, Mollerach, Marta
Publicado 2021

Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Frequency-Dependent Selection

por McNally, Alan, Kallonen, Teemu, Connor, Christopher, Abudahab, Khalil, Aanensen, David M., Horner, Carolyne, Peacock, Sharon J., Parkhill, Julian, Croucher, Nicholas J., Corander, Jukka
Publicado 2019

Integrated chromosomal and plasmid sequence analyses reveal diverse modes of carbapenemase gene spread among Klebsiella pneumoniae

por David, Sophia, Cohen, Victoria, Reuter, Sandra, Sheppard, Anna E., Giani, Tommaso, Parkhill, Julian, Rossolini, Gian Maria, Feil, Edward J., Grundmann, Hajo, Aanensen, David M.
Publicado 2020

Global scenario of the RmtE pan-aminoglycoside-resistance mechanism: emergence of the rmtE4 gene in South America associated with a hospital-related IncL plasmid

por Delgado-Blas, Jose F., Ovejero, Cristina M., David, Sophia, Serna, Carlos, Pulido-Vadillo, Mario, Montero, Natalia, Aanensen, David M., Abadia-Patiño, Lorena, Gonzalez-Zorn, Bruno
Publicado 2023