Quantitative PCR versus metagenomics for monitoring antibiotic resistance genes: balancing high sensitivity and broad coverage

por Ferreira, Catarina, Otani, Saria, Aarestrup, Frank Møller, Manaia, Célia M
Publicado 2023

Quinolone-resistant Campylobacter Infections: Risk Factors and Clinical Consequences

por Engberg, Jørgen, Neimann, Jakob, Nielsen, Eva Møller, Aarestrup, Frank Møller, Fussing, Vivian
Publicado 2004

Dissection of the antimicrobial and hemolytic activity of Cap18: Generation of Cap18 derivatives with enhanced specificity

por Ebbensgaard, Anna, Mordhorst, Hanne, Overgaard, Michael Toft, Aarestrup, Frank Møller, Hansen, Egon Bech
Publicado 2018

Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods

por Ahrenfeldt, Johanne, Skaarup, Carina, Hasman, Henrik, Pedersen, Anders Gorm, Aarestrup, Frank Møller, Lund, Ole
Publicado 2017

Comparative Evaluation of the Antimicrobial Activity of Different Antimicrobial Peptides against a Range of Pathogenic Bacteria

por Ebbensgaard, Anna, Mordhorst, Hanne, Overgaard, Michael Toft, Nielsen, Claus Gyrup, Aarestrup, Frank Møller, Hansen, Egon Bech
Publicado 2015

A Bacterial Analysis Platform: An Integrated System for Analysing Bacterial Whole Genome Sequencing Data for Clinical Diagnostics and Surveillance

por Thomsen, Martin Christen Frølund, Ahrenfeldt, Johanne, Cisneros, Jose Luis Bellod, Jurtz, Vanessa, Larsen, Mette Voldby, Hasman, Henrik, Aarestrup, Frank Møller, Lund, Ole
Publicado 2016

High throughput resistance profiling of Plasmodium falciparum infections based on custom dual indexing and Illumina next generation sequencing-technology

por Nag, Sidsel, Dalgaard, Marlene D., Kofoed, Poul-Erik, Ursing, Johan, Crespo, Marina, Andersen, Lee O’Brien, Aarestrup, Frank Møller, Lund, Ole, Alifrangis, Michael
Publicado 2017

FI: The Fecobiome Initiative

por Sapountzis, Panagiotis, Teseo, Serafino, Otani, Saria, Aarestrup, Frank Møller, Forano, Evelyne, Suen, Garett, Tsiamis, George, Haley, Bradd, Van Kessel, Jo Ann, Huws, Sharon A.
Publicado 2022

SCCmecFinder, a Web-Based Tool for Typing of Staphylococcal Cassette Chromosome mec in Staphylococcus aureus Using Whole-Genome Sequence Data

por Kaya, Hülya, Hasman, Henrik, Larsen, Jesper, Stegger, Marc, Johannesen, Thor Bech, Allesøe, Rosa Lundbye, Lemvigh, Camilla Koldbæk, Aarestrup, Frank Møller, Lund, Ole, Larsen, Anders Rhod
Publicado 2018

Predicting β-lactam susceptibility from the genome of Streptococcus pneumoniae and other mitis group streptococci

por Eriksen, Helle Brander, Fuursted, Kurt, Jensen, Anders, Jensen, Christian Salgård, Nielsen, Xiaohui, Christensen, Jens Jørgen, Shewmaker, Patricia, Rebelo, Ana Rita, Aarestrup, Frank Møller, Schønning, Kristian, Slotved, Hans-Christian
Publicado 2023

Fatal Septicemia Linked to Transmission of MRSA Clonal Complex 398 in Hospital and Nursing Home, Denmark

por Nielsen, Rikke Thoft, Kemp, Michael, Holm, Anette, Skov, Marianne Nielsine, Detlefsen, Mette, Hasman, Henrik, Aarestrup, Frank Møller, Kaas, Rolf Sommer, Nielsen, Jesper Boye, Westh, Henrik, Kolmos, Hans Jørn
Publicado 2016

Danish Whole-Genome-Sequenced Candida albicans and Candida glabrata Samples Fit into Globally Prevalent Clades

por Szarvas, Judit, Rebelo, Ana Rita, Bortolaia, Valeria, Leekitcharoenphon, Pimlapas, Schrøder Hansen, Dennis, Nielsen, Hans Linde, Nørskov-Lauritsen, Niels, Kemp, Michael, Røder, Bent Løwe, Frimodt-Møller, Niels, Søndergaard, Turid Snekloth, Coia, John Eugenio, Østergaard, Claus, Westh, Henrik, Aarestrup, Frank Møller
Publicado 2021

One Day in Denmark: Nationwide point-prevalence survey of human bacterial isolates and comparison of classical and whole-genome sequence-based species identification methods

por Rebelo, Ana Rita, Ibfelt, Tobias, Bortolaia, Valeria, Leekitcharoenphon, Pimlapas, Hansen, Dennis Schrøder, Nielsen, Hans Linde, Ellermann-Eriksen, Svend, Kemp, Michael, Røder, Bent Løwe, Frimodt-Møller, Niels, Søndergaard, Turid Snekloth, Coia, John Eugenio, Østergaard, Claus, Pedersen, Michael, Westh, Henrik, Aarestrup, Frank Møller
Publicado 2022

Whole genomes from bacteria collected at diagnostic units around the world 2020

por Nag, Sidsel, Larsen, Gunhild, Szarvas, Judit, Birkedahl, Laura Elmlund Kohl, Gulyás, Gábor Máté, Ciok, Wojchiech Jakub, Lagermann, Timmie Mikkel, Tafaj, Silva, Bradbury, Susan, Collignon, Peter, Daley, Denise, Dougnon, Victorien, Fabiyi, Kafayath, Coulibaly, Boubacar, Dembélé, René, Nikiema, Georgette, Magloire, Natama, Ouindgueta, Isidore Juste, Hossain, Zenat Zebin, Begum, Anowara, Donchev, Deyan, Diggle, Mathew, Turnbull, LeeAnn, Lévesque, Simon, Berlinger, Livia, Sogaard, Kirstine Kobberoe, Guevara, Paula Diaz, Valderrama, Carolina Duarte, Maikanti, Panagiota, Amlerova, Jana, Drevinek, Pavel, Tkadlec, Jan, Dilas, Milica, Kaasch, Achim, Westh, Henrik Torkil, Bachtarzi, Mohamed Azzedine, Amhis, Wahiba, Salazar, Carolina Elisabeth Satán, Villacis, JoséEduardo, Lúzon, Mária Angeles Dominguez, Palau, Dámaris Berbel, Duployez, Claire, Paluche, Maxime, Asante-Sefa, Solomon, Moller, Mie, Ip, Margaret, Mareković, Ivana, Pál-Sonnevend, Agnes, Cocuzza, Clementiza Elvezia, Dambrauskiene, Asta, Macanze, Alexandre, Cossa, Anelsio, Mandomando, Inácio, Nwajiobi-Princewill, Philip, Okeke, Iruka N., Kehinde, Aderemi O., Adebiyi, Ini, Akintayo, Ifeoluwa, Popoola, Oluwafemi, Onipede, Anthony, Blomfeldt, Anita, Nyquist, Nora Elisabeth, Bocker, Kiri, Ussher, James, Ali, Amjad, Ullah, Nimat, Khan, Habibullah, Gustafson, Natalie Weiler, Jarrar, Ikhlas, Al-Hamad, Arif, Luvira, Viravarn, Paveenkittiporn, Wantana, Baran, Irmak, Mwansa, James C. L., Sikakwa, Linda, Yamba, Kaunda, Hendriksen, Rene Sjogren, Aarestrup, Frank Moller
Publicado 2023