The planarian regeneration transcriptome reveals a shared but temporally shifted regulatory program between opposing head and tail scenarios

por Kao, Damian, Felix, Daniel, Aboobaker, Aziz
Publicado 2013

Feedback control in planarian stem cell systems

por Mangel, Marc, Bonsall, Michael B., Aboobaker, Aziz
Publicado 2016

Identification of putative enhancer-like elements predicts regulatory networks active in planarian adult stem cells

por Neiro, Jakke, Sridhar, Divya, Dattani, Anish, Aboobaker, Aziz
Publicado 2022

The Hunger Games as the Key to Happily Ever After?

por Deere, Jacques A, Xu, Clarice, Adelmant, Celestine, Aboobaker, Aziz, Salguero-Gómez, Roberto
Publicado 2023

Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNA-seq, RNA interference and irradiation approach

por Solana, Jordi, Kao, Damian, Mihaylova, Yuliana, Jaber-Hijazi, Farah, Malla, Sunir, Wilson, Ray, Aboobaker, Aziz
Publicado 2012

Ongoing repair of migration-coupled DNA damage allows planarian adult stem cells to reach wound sites

por Sahu, Sounak, Sridhar, Divya, Abnave, Prasad, Kosaka, Noboyoshi, Dattani, Anish, Thompson, James M, Hill, Mark A, Aboobaker, Aziz
Publicado 2021

Fine Mapping of the Pond Snail Left-Right Asymmetry (Chirality) Locus Using RAD-Seq and Fibre-FISH

por Liu, Mengning Maureen, Davey, John W., Banerjee, Ruby, Han, Jie, Yang, Fengtang, Aboobaker, Aziz, Blaxter, Mark L., Davison, Angus
Publicado 2013

Microbial protection favors parasite tolerance and alters host-parasite coevolutionary dynamics

por Rafaluk-Mohr, Charlotte, Gerth, Michael, Sealey, Jordan E., Ekroth, Alice K.E., Aboobaker, Aziz A., Kloock, Anke, King, Kayla C.
Publicado 2022

Uncovering the Genome-Wide Transcriptional Responses of the Filamentous Fungus Aspergillus niger to Lignocellulose Using RNA Sequencing

por Delmas, Stéphane, Pullan, Steven T., Gaddipati, Sanyasi, Kokolski, Matthew, Malla, Sunir, Blythe, Martin J., Ibbett, Roger, Campbell, Maria, Liddell, Susan, Aboobaker, Aziz, Tucker, Gregory A., Archer, David B.
Publicado 2012

ACME dissociation: a versatile cell fixation-dissociation method for single-cell transcriptomics

por García-Castro, Helena, Kenny, Nathan J., Iglesias, Marta, Álvarez-Campos, Patricia, Mason, Vincent, Elek, Anamaria, Schönauer, Anna, Sleight, Victoria A., Neiro, Jakke, Aboobaker, Aziz, Permanyer, Jon, Irimia, Manuel, Sebé-Pedrós, Arnau, Solana, Jordi
Publicado 2021

Efficient transgenesis and annotated genome sequence of the regenerative flatworm model Macrostomum lignano

por Wudarski, Jakub, Simanov, Daniil, Ustyantsev, Kirill, de Mulder, Katrien, Grelling, Margriet, Grudniewska, Magda, Beltman, Frank, Glazenburg, Lisa, Demircan, Turan, Wunderer, Julia, Qi, Weihong, Vizoso, Dita B., Weissert, Philipp M., Olivieri, Daniel, Mouton, Stijn, Guryev, Victor, Aboobaker, Aziz, Schärer, Lukas, Ladurner, Peter, Berezikov, Eugene
Publicado 2017

The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion

por Kao, Damian, Lai, Alvina G, Stamataki, Evangelia, Rosic, Silvana, Konstantinides, Nikolaos, Jarvis, Erin, Di Donfrancesco, Alessia, Pouchkina-Stancheva, Natalia, Sémon, Marie, Grillo, Marco, Bruce, Heather, Kumar, Suyash, Siwanowicz, Igor, Le, Andy, Lemire, Andrew, Eisen, Michael B, Extavour, Cassandra, Browne, William E, Wolff, Carsten, Averof, Michalis, Patel, Nipam H, Sarkies, Peter, Pavlopoulos, Anastasios, Aboobaker, Aziz
Publicado 2016