Transcriptome Fingerprinting Analysis: An Approach to Explore Gene Expression Patterns in Marine Microbial Communities

por Coll-Lladó, Montserrat, Acinas, Silvia G., Pujades, Cristina, Pedrós-Alió, Carlos
Publicado 2011

mTAGs: taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA genes

por Salazar, Guillem, Ruscheweyh, Hans-Joachim, Hildebrand, Falk, Acinas, Silvia G, Sunagawa, Shinichi
Publicado 2021

Patterns and architecture of genomic islands in marine bacteria

por Fernández-Gómez, Beatriz, Fernàndez-Guerra, Antonio, Casamayor, Emilio O, González, José M, Pedrós-Alió, Carlos, Acinas, Silvia G
Publicado 2012

Abiotic selection of microbial genome size in the global ocean

por Ngugi, David K., Acinas, Silvia G., Sánchez, Pablo, Gasol, Josep M., Agusti, Susana, Karl, David M., Duarte, Carlos M.
Publicado 2023

The Ocean Gene Atlas v2.0: online exploration of the biogeography and phylogeny of plankton genes

por Vernette, Caroline, Lecubin, Julien, Sánchez, Pablo, Sunagawa, Shinichi, Delmont, Tom O, Acinas, Silvia G, Pelletier, Eric, Hingamp, Pascal, Lescot, Magali
Publicado 2022

Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities

por Coutinho, Felipe H., Silveira, Cynthia B., Sebastián, Marta, Sánchez, Pablo, Duarte, Carlos M., Vaqué, Dolors, Gasol, Josep M., Acinas, Silvia G.
Publicado 2023

Scaling of species distribution explains the vast potential marine prokaryote diversity

por Eguíluz, Victor M., Salazar, Guillem, Fernández-Gracia, Juan, Pearman, John K., Gasol, Josep M., Acinas, Silvia G., Sunagawa, Shinichi, Irigoien, Xabier, Duarte, Carlos M.
Publicado 2019

Sequencing effort dictates gene discovery in marine microbial metagenomes

por Duarte, Carlos M., Ngugi, David K., Alam, Intikhab, Pearman, John, Kamau, Allan, Eguiluz, Victor M., Gojobori, Takashi, Acinas, Silvia G., Gasol, Josep M., Bajic, Vladimir, Irigoien, Xabier
Publicado 2020

Life-Style and Genome Structure of Marine Pseudoalteromonas Siphovirus B8b Isolated from the Northwestern Mediterranean Sea

por Lara, Elena, Holmfeldt, Karin, Solonenko, Natalie, Sà, Elisabet Laia, Ignacio-Espinoza, J. Cesar, Cornejo-Castillo, Francisco M., Verberkmoes, Nathan C., Vaqué, Dolors, Sullivan, Matthew B., Acinas, Silvia G.
Publicado 2015

Prevalence of Heterotrophic Methylmercury Detoxifying Bacteria across Oceanic Regions

por Sanz-Sáez, Isabel, Pereira-García, Carla, Bravo, Andrea G., Trujillo, Laura, Pla i Ferriol, Martí, Capilla, Miguel, Sánchez, Pablo, Rodríguez Martín-Doimeadios, Rosa Carmen, Acinas, Silvia G., Sánchez, Olga
Publicado 2022

Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes

por Royo-Llonch, Marta, Ferrera, Isabel, Cornejo-Castillo, Francisco M., Sánchez, Pablo, Salazar, Guillem, Stepanauskas, Ramunas, González, José M., Sieracki, Michael E., Speich, Sabrina, Stemmann, Lars, Pedrós-Alió, Carlos, Acinas, Silvia G.
Publicado 2017

Closing the gaps on the viral photosystem‐I  psaDCAB gene organization

por Roitman, Sheila, Flores‐Uribe, José, Philosof, Alon, Knowles, Ben, Rohwer, Forest, Ignacio‐Espinoza, J. Cesar, Sullivan, Matthew B., Cornejo‐Castillo, Francisco M., Sánchez, Pablo, Acinas, Silvia G., Dupont, Chris L., Béjà, Oded
Publicado 2015

Global biogeography of the smallest plankton across ocean depths

por Junger, Pedro C., Sarmento, Hugo, Giner, Caterina R., Mestre, Mireia, Sebastián, Marta, Morán, Xosé Anxelu G., Arístegui, Javier, Agustí, Susana, Duarte, Carlos M., Acinas, Silvia G., Massana, Ramon, Gasol, Josep M., Logares, Ramiro
Publicado 2023

A robust approach to estimate relative phytoplankton cell abundances from metagenomes

por Pierella Karlusich, Juan José, Pelletier, Eric, Zinger, Lucie, Lombard, Fabien, Zingone, Adriana, Colin, Sébastien, Gasol, Josep M., Dorrell, Richard G., Henry, Nicolas, Scalco, Eleonora, Acinas, Silvia G., Wincker, Patrick, de Vargas, Colomban, Bowler, Chris
Publicado 2022

Diversity and distribution of marine heterotrophic bacteria from a large culture collection

por Sanz-Sáez, Isabel, Salazar, Guillem, Sánchez, Pablo, Lara, Elena, Royo-Llonch, Marta, Sà, Elisabet L., Lucena, Teresa, Pujalte, María J., Vaqué, Dolors, Duarte, Carlos M., Gasol, Josep M., Pedrós-Alió, Carlos, Sánchez, Olga, Acinas, Silvia G.
Publicado 2020

Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods

por Pierella Karlusich, Juan José, Pelletier, Eric, Lombard, Fabien, Carsique, Madeline, Dvorak, Etienne, Colin, Sébastien, Picheral, Marc, Cornejo-Castillo, Francisco M., Acinas, Silvia G., Pepperkok, Rainer, Karsenti, Eric, de Vargas, Colomban, Wincker, Patrick, Bowler, Chris, Foster, Rachel A.
Publicado 2021

Single-virus genomics reveals hidden cosmopolitan and abundant viruses

por Martinez-Hernandez, Francisco, Fornas, Oscar, Lluesma Gomez, Monica, Bolduc, Benjamin, de la Cruz Peña, Maria Jose, Martínez, Joaquín Martínez, Anton, Josefa, Gasol, Josep M., Rosselli, Riccardo, Rodriguez-Valera, Francisco, Sullivan, Matthew B., Acinas, Silvia G., Martinez-Garcia, Manuel
Publicado 2017

Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation

por Sanz-Sáez, Isabel, Sánchez, Pablo, Salazar, Guillem, Sunagawa, Shinichi, de Vargas, Colomban, Bowler, Chris, Sullivan, Matthew B., Wincker, Patrick, Karsenti, Eric, Pedrós-Alió, Carlos, Agustí, Susana, Gojobori, Takashi, Duarte, Carlos M., Gasol, Josep M., Sánchez, Olga, Acinas, Silvia G.
Publicado 2023

Cyanobacterial symbionts diverged in the late Cretaceous towards lineage-specific nitrogen fixation factories in single-celled phytoplankton

por Cornejo-Castillo, Francisco M., Cabello, Ana M., Salazar, Guillem, Sánchez-Baracaldo, Patricia, Lima-Mendez, Gipsi, Hingamp, Pascal, Alberti, Adriana, Sunagawa, Shinichi, Bork, Peer, de Vargas, Colomban, Raes, Jeroen, Bowler, Chris, Wincker, Patrick, Zehr, Jonathan P., Gasol, Josep M., Massana, Ramon, Acinas, Silvia G.
Publicado 2016

Disentangling the mechanisms shaping the surface ocean microbiota

por Logares, Ramiro, Deutschmann, Ina M., Junger, Pedro C., Giner, Caterina R., Krabberød, Anders K., Schmidt, Thomas S. B., Rubinat-Ripoll, Laura, Mestre, Mireia, Salazar, Guillem, Ruiz-González, Clara, Sebastián, Marta, de Vargas, Colomban, Acinas, Silvia G., Duarte, Carlos M., Gasol, Josep M., Massana, Ramon
Publicado 2020