Keemei: cloud-based validation of tabular bioinformatics file formats in Google Sheets

por Rideout, Jai Ram, Chase, John H., Bolyen, Evan, Ackermann, Gail, González, Antonio, Knight, Rob, Caporaso, J. Gregory
Publicado 2016

redbiom: a Rapid Sample Discovery and Feature Characterization System

por McDonald, Daniel, Kaehler, Benjamin, Gonzalez, Antonio, DeReus, Jeff, Ackermann, Gail, Marotz, Clarisse, Huttley, Gavin, Knight, Rob
Publicado 2019

Individuals with substance use disorders have a distinct oral microbiome pattern

por Kosciolek, Tomasz, Victor, Teresa A., Kuplicki, Rayus, Rossi, Maret, Estaki, Mehrbod, Ackermann, Gail, Knight, Rob, Paulus, Martin P.
Publicado 2021

Meta-analyses of studies of the human microbiota

por Lozupone, Catherine A., Stombaugh, Jesse, Gonzalez, Antonio, Ackermann, Gail, Wendel, Doug, Vázquez-Baeza, Yoshiki, Jansson, Janet K., Gordon, Jeffrey I., Knight, Rob
Publicado 2013

Evaluation of the Effect of Storage Methods on Fecal, Saliva, and Skin Microbiome Composition

por Marotz, Clarisse, Cavagnero, Kellen J., Song, Se Jin, McDonald, Daniel, Wandro, Stephen, Humphrey, Greg, Bryant, MacKenzie, Ackermann, Gail, Diaz, Edgar, Knight, Rob
Publicado 2021

Subtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems

por Potter, Caitlin, Freeman, Chris, Golyshin, Peter N., Ackermann, Gail, Fenner, Nathalie, McDonald, James E., Ehbair, Abdassalam, Jones, Timothy G., Murphy, Loretta M., Creer, Simon
Publicado 2017

Extreme Dysbiosis of the Microbiome in Critical Illness

por McDonald, Daniel, Ackermann, Gail, Khailova, Ludmila, Baird, Christine, Heyland, Daren, Kozar, Rosemary, Lemieux, Margot, Derenski, Karrie, King, Judy, Vis-Kampen, Christine, Knight, Rob, Wischmeyer, Paul E.
Publicado 2016

Vitamin D metabolites and the gut microbiome in older men

por Thomas, Robert L., Jiang, Lingjing, Adams, John S., Xu, Zhenjiang Zech, Shen, Jian, Janssen, Stefan, Ackermann, Gail, Vanderschueren, Dirk, Pauwels, Steven, Knight, Rob, Orwoll, Eric S., Kado, Deborah M.
Publicado 2020

Exposure to toxic metals triggers unique responses from the rat gut microbiota

por Richardson, Joshua B., Dancy, Blair C. R., Horton, Cassandra L., Lee, Young S., Madejczyk, Michael S., Xu, Zhenjiang Zech, Ackermann, Gail, Humphrey, Gregory, Palacios, Gustavo, Knight, Rob, Lewis, John A.
Publicado 2018

The Molecular Effect of Wearing Silver-Threaded Clothing on the Human Skin

por Melnik, Alexey V., Callewaert, Chris, Dorrestein, Kathleen, Broadhead, Rosie, Minich, Jeremiah J., Ernst, Madeleine, Humphrey, Greg, Ackermann, Gail, Gathercole, Rob, Aksenov, Alexander A., Knight, Rob, Dorrestein, Pieter C.
Publicado 2023

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys

por Walters, William, Hyde, Embriette R., Berg-Lyons, Donna, Ackermann, Gail, Humphrey, Greg, Parada, Alma, Gilbert, Jack A., Jansson, Janet K., Caporaso, J. Gregory, Fuhrman, Jed A., Apprill, Amy, Knight, Rob
Publicado 2015

Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome

por Tripathi, Anupriya, Melnik, Alexey V., Xue, Jin, Poulsen, Orit, Meehan, Michael J., Humphrey, Gregory, Jiang, Lingjing, Ackermann, Gail, McDonald, Daniel, Zhou, Dan, Knight, Rob, Dorrestein, Pieter C., Haddad, Gabriel G.
Publicado 2018

Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems

por Tripathi, Anupriya, Xu, Zhenjiang Zech, Xue, Jin, Poulsen, Orit, Gonzalez, Antonio, Humphrey, Gregory, Meehan, Michael J., Melnik, Alexey V., Ackermann, Gail, Zhou, Dan, Malhotra, Atul, Haddad, Gabriel G., Dorrestein, Pieter C., Knight, Rob
Publicado 2019

Digitizing mass spectrometry data to explore the chemical diversity and distribution of marine cyanobacteria and algae

por Luzzatto-Knaan, Tal, Garg, Neha, Wang, Mingxun, Glukhov, Evgenia, Peng, Yao, Ackermann, Gail, Amir, Amnon, Duggan, Brendan M, Ryazanov, Sergey, Gerwick, Lena, Knight, Rob, Alexandrov, Theodore, Bandeira, Nuno, Gerwick, William H, Dorrestein, Pieter C
Publicado 2017

Bacterial and Chemical Evidence of Coastal Water Pollution from the Tijuana River in Sea Spray Aerosol

por Pendergraft, Matthew A., Belda-Ferre, Pedro, Petras, Daniel, Morris, Clare K., Mitts, Brock A., Aron, Allegra T., Bryant, MacKenzie, Schwartz, Tara, Ackermann, Gail, Humphrey, Greg, Kaandorp, Ethan, Dorrestein, Pieter C., Knight, Rob, Prather, Kimberly A.
Publicado 2023

The Oral and Skin Microbiomes of Captive Komodo Dragons Are Significantly Shared with Their Habitat

por Hyde, Embriette R., Navas-Molina, Jose A., Song, Se Jin, Kueneman, Jordan G., Ackermann, Gail, Cardona, Cesar, Humphrey, Gregory, Boyer, Don, Weaver, Tom, Mendelson, Joseph R., McKenzie, Valerie J., Gilbert, Jack A., Knight, Rob
Publicado 2016

Niche partitioning of a pathogenic microbiome driven by chemical gradients

por Quinn, Robert A., Comstock, William, Zhang, Tianyu, Morton, James T., da Silva, Ricardo, Tran, Alda, Aksenov, Alexander, Nothias, Louis-Felix, Wangpraseurt, Daniel, Melnik, Alexey V., Ackermann, Gail, Conrad, Douglas, Klapper, Isaac, Knight, Rob, Dorrestein, Pieter C.
Publicado 2018

High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

por Raghuvanshi, Ruma, Vasco, Karla, Vázquez-Baeza, Yoshiki, Jiang, Lingjing, Morton, James T., Li, Danxun, Gonzalez, Antonio, DeRight Goldasich, Lindsay, Humphrey, Gregory, Ackermann, Gail, Swafford, Austin D., Conrad, Douglas, Knight, Rob, Dorrestein, Pieter C., Quinn, Robert A.
Publicado 2020

A microbial clock provides an accurate estimate of the postmortem interval in a mouse model system

por Metcalf, Jessica L, Wegener Parfrey, Laura, Gonzalez, Antonio, Lauber, Christian L, Knights, Dan, Ackermann, Gail, Humphrey, Gregory C, Gebert, Matthew J, Van Treuren, Will, Berg-Lyons, Donna, Keepers, Kyle, Guo, Yan, Bullard, James, Fierer, Noah, Carter, David O, Knight, Rob
Publicado 2013

Assessment of the microbiome during bacteriophage therapy in combination with systemic antibiotics to treat a case of staphylococcal device infection

por Mu, Andre, McDonald, Daniel, Jarmusch, Alan K., Martino, Cameron, Brennan, Caitriona, Bryant, Mackenzie, Humphrey, Gregory C., Toronczak, Julia, Schwartz, Tara, Nguyen, Dominic, Ackermann, Gail, D’Onofrio, Anthony, Strathdee, Steffanie A., Schooley, Robert T., Dorrestein, Pieter C., Knight, Rob, Aslam, Saima
Publicado 2021