Circular RNA expression and regulatory network prediction in posterior cingulate astrocytes in elderly subjects

por Sekar, Shobana, Cuyugan, Lori, Adkins, Jonathan, Geiger, Philipp, Liang, Winnie S.
Publicado 2018

ACValidator: A novel assembly-based approach for in silico verification of circular RNAs

por Sekar, Shobana, Geiger, Philipp, Adkins, Jonathan, Tassone, Erica, Serrano, Geidy, Beach, Thomas G, Liang, Winnie S
Publicado 2020

Identification of therapeutic targets in chordoma through comprehensive genomic and transcriptomic analyses

por Liang, Winnie S., Dardis, Christopher, Helland, Adrienne, Sekar, Shobana, Adkins, Jonathan, Cuyugan, Lori, Enriquez, Daniel, Byron, Sara, Little, Andrew S.
Publicado 2018

Leveraging Spatial Variation in Tumor Purity for Improved Somatic Variant Calling of Archival Tumor Only Samples

por Halperin, Rebecca F., Liang, Winnie S., Kulkarni, Sidharth, Tassone, Erica E., Adkins, Jonathan, Enriquez, Daniel, Tran, Nhan L., Hank, Nicole C., Newell, James, Kodira, Chinnappa, Korn, Ronald, Berens, Michael E., Kim, Seungchan, Byron, Sara A.
Publicado 2019

A somatic reference standard for cancer genome sequencing

por Craig, David W., Nasser, Sara, Corbett, Richard, Chan, Simon K., Murray, Lisa, Legendre, Christophe, Tembe, Waibhav, Adkins, Jonathan, Kim, Nancy, Wong, Shukmei, Baker, Angela, Enriquez, Daniel, Pond, Stephanie, Pleasance, Erin, Mungall, Andrew J., Moore, Richard A., McDaniel, Timothy, Ma, Yussanne, Jones, Steven J. M., Marra, Marco A., Carpten, John D., Liang, Winnie S.
Publicado 2016

Integrated genomic analyses reveal frequent TERT aberrations in acral melanoma

por Liang, Winnie S., Hendricks, William, Kiefer, Jeffrey, Schmidt, Jessica, Sekar, Shobana, Carpten, John, Craig, David W., Adkins, Jonathan, Cuyugan, Lori, Manojlovic, Zarko, Halperin, Rebecca F., Helland, Adrienne, Nasser, Sara, Legendre, Christophe, Hurley, Laurence H., Sivaprakasam, Karthigayini, Johnson, Douglas B., Crandall, Holly, Busam, Klaus J., Zismann, Victoria, Deluca, Valerie, Lee, Jeeyun, Sekulic, Aleksandar, Ariyan, Charlotte E., Sosman, Jeffrey, Trent, Jeffrey
Publicado 2017

Multiscale, multimodal analysis of tumor heterogeneity in IDH1 mutant vs wild-type diffuse gliomas

por Berens, Michael E., Sood, Anup, Barnholtz-Sloan, Jill S., Graf, John F., Cho, Sanghee, Kim, Seungchan, Kiefer, Jeffrey, Byron, Sara A., Halperin, Rebecca F., Nasser, Sara, Adkins, Jonathan, Cuyugan, Lori, Devine, Karen, Ostrom, Quinn, Couce, Marta, Wolansky, Leo, McDonough, Elizabeth, Schyberg, Shannon, Dinn, Sean, Sloan, Andrew E., Prados, Michael, Phillips, Joanna J., Nelson, Sarah J., Liang, Winnie S., Al-Kofahi, Yousef, Rusu, Mirabela, Zavodszky, Maria I., Ginty, Fiona
Publicado 2019

Comprehensive Genomic Analysis of Metastatic Mucinous Urethral Adenocarcinoma Guides Precision Oncology Treatment: Targetable EGFR Amplification Leading to Successful Treatment Wit...

por Bryce, Alan H., Borad, Mitesh J., Egan, Jan B., Condjella, Rachel M., Liang, Winnie S., Fonseca, Rafael, McCullough, Ann E., Hunt, Katherine S., Ritacca, Nicole R., Barrett, Michael T., Patel, Maitray D., Young, Scott W., Silva, Alvin C., Ho, Thai H., Halfdanarson, Thorvardur R., Stanton, Melissa L., Cheville, John, Swanson, Scott, Schneider, Daniel E., McWilliams, Robert R., Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Cuyugan, Lori, McDonald, Jacquelyn, Adkins, Jonathan, Mastrian, Stephen D., Von Hoff, Daniel D., Craig, David W., Stewart, A. Keith, Carpten, John D.
Publicado 2016

Clinical Implementation of Integrated Genomic Profiling in Patients with Advanced Cancers

por Borad, Mitesh J., Egan, Jan B., Condjella, Rachel M., Liang, Winnie S., Fonseca, Rafael, Ritacca, Nicole R., McCullough, Ann E., Barrett, Michael T., Hunt, Katherine S., Champion, Mia D., Patel, Maitray D., Young, Scott W., Silva, Alvin C., Ho, Thai H., Halfdanarson, Thorvardur R., McWilliams, Robert R., Lazaridis, Konstantinos N., Ramanathan, Ramesh K., Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Cuyugan, Lori, McDonald, Jacquelyn, Adkins, Jonathan, Mastrian, Stephen D., Valdez, Riccardo, Jaroszewski, Dawn E., Von Hoff, Daniel D., Craig, David W., Stewart, A. Keith, Carpten, John D., Bryce, Alan H.
Publicado 2016

Identifying treatment options for BRAF(V600) wild-type metastatic melanoma: A SU2C/MRA genomics-enabled clinical trial

por LoRusso, Patricia M., Sekulic, Aleksandar, Sosman, Jeffrey A., Liang, Winnie S., Carpten, John, Craig, David W., Solit, David B., Bryce, Alan H., Kiefer, Jeffrey A., Aldrich, Jessica, Nasser, Sara, Halperin, Rebecca, Byron, Sara A., Pilat, Mary Jo, Boerner, Scott A., Durecki, Diane, Hendricks, William P. D., Enriquez, Daniel, Izatt, Tyler, Keats, Jonathan, Legendre, Christophe, Markovic, Svetomir N., Weise, Amy, Naveed, Fatima, Schmidt, Jessica, Basu, Gargi D., Sekar, Shobana, Adkins, Jonathan, Tassone, Erica, Sivaprakasam, Karthigayini, Zismann, Victoria, Calvert, Valerie S., Petricoin, Emanuel F., Fecher, Leslie Anne, Lao, Christopher, Eder, J. Paul, Vogelzang, Nicholas J., Perlmutter, Jane, Gorman, Mark, Manica, Barbara, Fox, Lisa, Schork, Nicholas, Zelterman, Daniel, DeVeaux, Michelle, Joseph, Richard W., Cowey, C. Lance, Trent, Jeffrey M.
Publicado 2021

Integrated Genomic Characterization Reveals Novel, Therapeutically Relevant Drug Targets in FGFR and EGFR Pathways in Sporadic Intrahepatic Cholangiocarcinoma

por Borad, Mitesh J., Champion, Mia D., Egan, Jan B., Liang, Winnie S., Fonseca, Rafael, Bryce, Alan H., McCullough, Ann E., Barrett, Michael T., Hunt, Katherine, Patel, Maitray D., Young, Scott W., Collins, Joseph M., Silva, Alvin C., Condjella, Rachel M., Block, Matthew, McWilliams, Robert R., Lazaridis, Konstantinos N., Klee, Eric W., Bible, Keith C., Harris, Pamela, Oliver, Gavin R., Bhavsar, Jaysheel D., Nair, Asha A., Middha, Sumit, Asmann, Yan, Kocher, Jean-Pierre, Schahl, Kimberly, Kipp, Benjamin R., Barr Fritcher, Emily G., Baker, Angela, Aldrich, Jessica, Kurdoglu, Ahmet, Izatt, Tyler, Christoforides, Alexis, Cherni, Irene, Nasser, Sara, Reiman, Rebecca, Phillips, Lori, McDonald, Jackie, Adkins, Jonathan, Mastrian, Stephen D., Placek, Pamela, Watanabe, Aprill T., LoBello, Janine, Han, Haiyong, Von Hoff, Daniel, Craig, David W., Stewart, A. Keith, Carpten, John D.
Publicado 2014