A 2022 Update on Computational Approaches to the Discovery and Design of Antimicrobial Peptides

por Agüero-Chapin, Guillermin, Antunes, Agostinho, Marrero-Ponce, Yovani
Publicado 2023

Surveying alignment-free features for Ortholog detection in related yeast proteomes by using supervised big data classifiers

por Galpert, Deborah, Fernández, Alberto, Herrera, Francisco, Antunes, Agostinho, Molina-Ruiz, Reinaldo, Agüero-Chapin, Guillermin
Publicado 2018

An Effective Big Data Supervised Imbalanced Classification Approach for Ortholog Detection in Related Yeast Species

por Galpert, Deborah, del Río, Sara, Herrera, Francisco, Ancede-Gallardo, Evys, Antunes, Agostinho, Agüero-Chapin, Guillermin
Publicado 2015

Exploring general-purpose protein features for distinguishing enzymes and non-enzymes within the twilight zone

por Ruiz-Blanco, Yasser B., Agüero-Chapin, Guillermin, García-Hernández, Enrique, Álvarez, Orlando, Antunes, Agostinho, Green, James
Publicado 2017

Elucidating the Racemization Mechanism of Aliphatic and Aromatic Amino Acids by In Silico Tools

por Andino, Mateo S., Mora, José R., Paz, José L., Márquez, Edgar A., Perez-Castillo, Yunierkis, Agüero-Chapin, Guillermin
Publicado 2023

Shotgun Proteomics of Ascidians Tunic Gives New Insights on Host–Microbe Interactions by Revealing Diverse Antimicrobial Peptides

por Matos, Ana, Domínguez-Pérez, Dany, Almeida, Daniela, Agüero-Chapin, Guillermin, Campos, Alexandre, Osório, Hugo, Vasconcelos, Vitor, Antunes, Agostinho
Publicado 2020

Putative Antimicrobial Peptides of the Posterior Salivary Glands from the Cephalopod Octopus vulgaris Revealed by Exploring a Composite Protein Database

por Almeida, Daniela, Domínguez-Pérez, Dany, Matos, Ana, Agüero-Chapin, Guillermin, Osório, Hugo, Vasconcelos, Vitor, Campos, Alexandre, Antunes, Agostinho
Publicado 2020

A Novel Network Science and Similarity-Searching-Based Approach for Discovering Potential Tumor-Homing Peptides from Antimicrobials

por Romero, Maylin, Marrero-Ponce, Yovani, Rodríguez, Hortensia, Agüero-Chapin, Guillermin, Antunes, Agostinho, Aguilera-Mendoza, Longendri, Martinez-Rios, Felix
Publicado 2022

Fuzzy spherical truncation-based multi-linear protein descriptors: From their definition to application in structural-related predictions

por Contreras-Torres, Ernesto, Marrero-Ponce, Yovani, Terán, Julio E., Agüero-Chapin, Guillermin, Antunes, Agostinho, García-Jacas, César R.
Publicado 2022

Exploring the Adenylation Domain Repertoire of Nonribosomal Peptide Synthetases Using an Ensemble of Sequence-Search Methods

por Agüero-Chapin, Guillermin, Molina-Ruiz, Reinaldo, Maldonado, Emanuel, de la Riva, Gustavo, Sánchez-Rodríguez, Aminael, Vasconcelos, Vitor, Antunes, Agostinho
Publicado 2013

ShadowCaster: Compositional Methods under the Shadow of Phylogenetic Models to Detect Horizontal Gene Transfers in Prokaryotes

por Sánchez-Soto, Daniela, Agüero-Chapin, Guillermin, Armijos-Jaramillo, Vinicio, Perez-Castillo, Yunierkis, Tejera, Eduardo, Antunes, Agostinho, Sánchez-Rodríguez, Aminael
Publicado 2020

Emerging Computational Approaches for Antimicrobial Peptide Discovery

por Agüero-Chapin, Guillermin, Galpert-Cañizares, Deborah, Domínguez-Pérez, Dany, Marrero-Ponce, Yovani, Pérez-Machado, Gisselle, Teijeira, Marta, Antunes, Agostinho
Publicado 2022

Network Science and Group Fusion Similarity-Based Searching to Explore the Chemical Space of Antiparasitic Peptides

por Ayala-Ruano, Sebastián, Marrero-Ponce, Yovani, Aguilera-Mendoza, Longendri, Pérez, Noel, Agüero-Chapin, Guillermin, Antunes, Agostinho, Aguilar, Ana Cristina
Publicado 2022

Graph Theory-Based Sequence Descriptors as Remote Homology Predictors

por Agüero-Chapin, Guillermin, Galpert, Deborah, Molina-Ruiz, Reinaldo, Ancede-Gallardo, Evys, Pérez-Machado, Gisselle, De la Riva, Gustavo A., Antunes, Agostinho
Publicado 2019

An Alignment-Free Approach for Eukaryotic ITS2 Annotation and Phylogenetic Inference

por Agüero-Chapin, Guillermin, Sánchez-Rodríguez, Aminael, Hidalgo-Yanes, Pedro I., Pérez-Castillo, Yunierkis, Molina-Ruiz, Reinaldo, Marchal, Kathleen, Vasconcelos, Vítor, Antunes, Agostinho
Publicado 2011

ABP-Finder: A Tool to Identify Antibacterial Peptides and the Gram-Staining Type of Targeted Bacteria

por Ruiz-Blanco, Yasser B., Agüero-Chapin, Guillermin, Romero-Molina, Sandra, Antunes, Agostinho, Olari, Lia-Raluca, Spellerberg, Barbara, Münch, Jan, Sanchez-Garcia, Elsa
Publicado 2022

Complex Networks Analyses of Antibiofilm Peptides: An Emerging Tool for Next-Generation Antimicrobials’ Discovery

por Agüero-Chapin, Guillermin, Antunes, Agostinho, Mora, José R., Pérez, Noel, Contreras-Torres, Ernesto, Valdes-Martini, José R., Martinez-Rios, Felix, Zambrano, Cesar H., Marrero-Ponce, Yovani
Publicado 2023

QSAR for RNases and theoretic–experimental study of molecular diversity on peptide mass fingerprints of a new Leishmania infantum protein

por González-Díaz, Humberto, Dea-Ayuela, María A., Pérez-Montoto, Lázaro G., Prado-Prado, Francisco J., Agüero-Chapín, Guillermín, Bolas-Fernández, Francisco, Vazquez-Padrón, Roberto I., Ubeira, Florencio M.
Publicado 2009

Computational Design of Inhibitors Targeting the Catalytic β Subunit of Escherichia coli F(O)F(1)-ATP Synthase

por Avila-Barrientos, Luis Pablo, Cofas-Vargas, Luis Fernando, Agüero-Chapin, Guillermin, Hernández-García, Enrique, Ruiz-Carmona, Sergio, Valdez-Cruz, Norma A., Trujillo-Roldán, Mauricio, Weber, Joachim, Ruiz-Blanco, Yasser B., Barril, Xavier, García-Hernández, Enrique
Publicado 2022