Diversity and Distribution of Marine Synechococcus: Multiple Gene Phylogenies for Consensus Classification and Development of qPCR Assays for Sensitive Measurement of Clades in the...

por Ahlgren, Nathan A., Rocap, Gabrielle
Publicado 2012

Diverse Marine T4-like Cyanophage Communities Are Primarily Comprised of Low-Abundance Species Including Species with Distinct Seasonal, Persistent, Occasional, or Sporadic Dynamic...

por Dart, Emily, Fuhrman, Jed A., Ahlgren, Nathan A.
Publicado 2023

County-level societal predictors of COVID-19 cases and deaths changed through time in the United States: A longitudinal ecological study

por Bergmann, Philip J., Ahlgren, Nathan A., Torres Stone, Rosalie A.
Publicado 2022

Alignment-free [Formula: see text] oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences

por Ahlgren, Nathan A., Ren, Jie, Lu, Yang Young, Fuhrman, Jed A., Sun, Fengzhu
Publicado 2017

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

por Ren, Jie, Ahlgren, Nathan A., Lu, Yang Young, Fuhrman, Jed A., Sun, Fengzhu
Publicado 2017

Genome Sequence of the Estuarine Synechococcus sp. Strain NB0720_010

por MacKenzie, Campbell A., Marston, Marcia F., Tabima, Javier F., Ahlgren, Nathan A.
Publicado 2022

Prediction of virus-host infectious association by supervised learning methods

por Zhang, Mengge, Yang, Lianping, Ren, Jie, Ahlgren, Nathan A., Fuhrman, Jed A., Sun, Fengzhu
Publicado 2017

A network-based integrated framework for predicting virus–prokaryote interactions

por Wang, Weili, Ren, Jie, Tang, Kujin, Dart, Emily, Ignacio-Espinoza, Julio Cesar, Fuhrman, Jed A, Braun, Jonathan, Sun, Fengzhu, Ahlgren, Nathan A
Publicado 2020

Genome Sequences of Synechococcus sp. Strain MIT S9220 and Cocultured Cyanophage SynMITS9220M01

por Belisle, B. Shafer, Avila Paz, Andres A., Carpenter, Angelina R., Cormier, Tayla C., Lewis, Adam J., Menin, Linnea S., Oliveira, Daniel R., Song, BuKyung, Szeto, Amy, Tchantouridze, Elizabeth I., Watson, Kayleigh A., Yohannes, Mary T., Ahlgren, Nathan A.
Publicado 2020

Optimizing de novo genome assembly from PCR-amplified metagenomes

por Roux, Simon, Trubl, Gareth, Goudeau, Danielle, Nath, Nandita, Couradeau, Estelle, Ahlgren, Nathan A., Zhan, Yuanchao, Marsan, David, Chen, Feng, Fuhrman, Jed A., Northen, Trent R., Sullivan, Matthew B., Rich, Virginia I., Malmstrom, Rex R., Eloe-Fadrosh, Emiley A.
Publicado 2019