Juicebox.js Provides a Cloud-Based Visualization System for Hi-C Data

por Robinson, James T., Turner, Douglass, Durand, Neva C., Thorvaldsdóttir, Helga, Mesirov, Jill P., Aiden, Erez Lieberman
Publicado 2018

Using deep learning and Google Street View to estimate the demographic makeup of neighborhoods across the United States

por Gebru, Timnit, Krause, Jonathan, Wang, Yilun, Chen, Duyun, Deng, Jia, Aiden, Erez Lieberman, Fei-Fei, Li
Publicado 2017

Interphase chromosomes of the Aedes aegypti mosquito are liquid crystalline and can sense mechanical cues

por Contessoto, Vinícius G., Dudchenko, Olga, Aiden, Erez Lieberman, Wolynes, Peter G., Onuchic, José N., Di Pierro, Michele
Publicado 2023

A chromosome-level genome sequence assembly of the red raspberry (Rubus idaeus L.)

por Davik, Jahn, Røen, Dag, Lysøe, Erik, Buti, Matteo, Rossman, Simeon, Alsheikh, Muath, Aiden, Erez Lieberman, Dudchenko, Olga, Sargent, Daniel James
Publicado 2022

Proximity-dependent recruitment of Polycomb repressive complexes by the lncRNA Airn

por Braceros, Aki K., Schertzer, Megan D., Omer, Arina, Trotman, Jackson B., Davis, Eric S., Dowen, Jill M., Phanstiel, Douglas H., Aiden, Erez Lieberman, Calabrese, J. Mauro
Publicado 2023

Somatic structural variant formation is guided by and influences genome architecture

por Sidiropoulos, Nikos, Mardin, Balca R., Rodríguez-González, F. Germán, Bochkov, Ivan D., Garg, Shilpa, Stütz, Adrian M., Korbel, Jan O., Aiden, Erez Lieberman, Weischenfeldt, Joachim
Publicado 2022

A Chromosome-Length Assembly of the Hawaiian Monk Seal (Neomonachus schauinslandi): A History of “Genetic Purging” and Genomic Stability

por Mohr, David W., Gaughran, Stephen J., Paschall, Justin, Naguib, Ahmed, Pang, Andy Wing Chun, Dudchenko, Olga, Aiden, Erez Lieberman, Church, Deanna M., Scott, Alan F.
Publicado 2022

Essential role of Cp190 in physical and regulatory boundary formation

por Kaushal, Anjali, Dorier, Julien, Wang, Bihan, Mohana, Giriram, Taschner, Michael, Cousin, Pascal, Waridel, Patrice, Iseli, Christian, Semenova, Anastasiia, Restrepo, Simon, Guex, Nicolas, Aiden, Erez Lieberman, Gambetta, Maria Cristina
Publicado 2022

Chromosome-length genome assembly of Teladorsagia circumcincta – a globally important helminth parasite in livestock

por Hassan, Shamshad Ul, Chua, Eng Guan, Paz, Erwin A., Tay, Chin Yen, Greeff, Johan C., Palmer, Dieter G., Dudchenko, Olga, Aiden, Erez Lieberman, Martin, Graeme B., Kaur, Parwinder
Publicado 2023

The Fundamental Role of Chromatin Loop Extrusion in Physiological V(D)J Recombination

por Zhang, Yu, Zhang, Xuefei, Ba, Zhaoqing, Liang, Zhuoyi, Dring, Eddie, Hu, Hongli, Lou, Jiangman, Kyritsis, Nia, Zurita, Jeffrey, Shamim, Muhammad S., Aiden, Aviva Presser, Aiden, Erez Lieberman, Alt, Frederick W.
Publicado 2019

De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome

por Lamb, Sydney, Taylor, Adam M., Hughes, Tabitha A., McMillan, Brock R., Larsen, Randy T., Khan, Ruqayya, Weisz, David, Dudchenko, Olga, Aiden, Erez Lieberman, Edelman, Nathaniel B., Frandsen, Paul B.
Publicado 2021

Whole genome analysis of clouded leopard species reveals an ancient divergence and distinct demographic histories

por Bursell, Madeline G., Dikow, Rebecca B., Figueiró, Henrique V., Dudchenko, Olga, Flanagan, Joseph P., Aiden, Erez Lieberman, Goossens, Benoit, Nathan, Senthilvel K.S.S., Johnson, Warren E., Koepfli, Klaus-Peter, Frandsen, Paul B.
Publicado 2022

A pan‐genome and chromosome‐length reference genome of narrow‐leafed lupin (Lupinus angustifolius) reveals genomic diversity and insights into key industry and biological traits...

por Garg, Gagan, Kamphuis, Lars G., Bayer, Philipp E., Kaur, Parwinder, Dudchenko, Olga, Taylor, Candy M., Frick, Karen M., Foley, Rhonda C., Gao, Ling‐Ling, Aiden, Erez Lieberman, Edwards, David, Singh, Karam B.
Publicado 2022

A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly

por Tolman, Ethan R, Beatty, Christopher D, Bush, Jonas, Kohli, Manpreet, Moreno, Carlos M, Ware, Jessica L, Weber, K Scott, Khan, Ruqayya, Maheshwari, Chirag, Weisz, David, Dudchenko, Olga, Aiden, Erez Lieberman, Frandsen, Paul B
Publicado 2023

CTCF looping is established during gastrulation in medaka embryos

por Nakamura, Ryohei, Motai, Yuichi, Kumagai, Masahiko, Wike, Candice L., Nishiyama, Haruyo, Nakatani, Yoichiro, Durand, Neva C., Kondo, Kaori, Kondo, Takashi, Tsukahara, Tatsuya, Shimada, Atsuko, Cairns, Bradley R., Aiden, Erez Lieberman, Morishita, Shinichi, Takeda, Hiroyuki
Publicado 2021

Chromatin architecture transitions from zebrafish sperm through early embryogenesis

por Wike, Candice L., Guo, Yixuan, Tan, Mengyao, Nakamura, Ryohei, Shaw, Dana Klatt, Díaz, Noelia, Whittaker-Tademy, Aneasha F., Durand, Neva C., Aiden, Erez Lieberman, Vaquerizas, Juan M., Grunwald, David, Takeda, Hiroyuki, Cairns, Bradley R.
Publicado 2021

Topologically Associated Domains Delineate Susceptibility to Somatic Hypermutation

por Senigl, Filip, Maman, Yaakov, Dinesh, Ravi K., Alinikula, Jukka, Seth, Rashu B., Pecnova, Lubomira, Omer, Arina D., Rao, Suhas S.P., Weisz, David, Buerstedde, Jean-Marie, Aiden, Erez Lieberman, Casellas, Rafael, Hejnar, Jiri, Schatz, David G.
Publicado 2019

Cohesin depleted cells rebuild functional nuclear compartments after endomitosis

por Cremer, Marion, Brandstetter, Katharina, Maiser, Andreas, Rao, Suhas S. P., Schmid, Volker J., Guirao-Ortiz, Miguel, Mitra, Namita, Mamberti, Stefania, Klein, Kyle N., Gilbert, David M., Leonhardt, Heinrich, Cardoso, M. Cristina, Aiden, Erez Lieberman, Harz, Hartmann, Cremer, Thomas
Publicado 2020

A rapid, low-cost, and highly sensitive SARS-CoV-2 diagnostic based on whole-genome sequencing

por Adastra, Per A., Durand, Neva C., Mitra, Namita, Pulido, Saul Godinez, Mahajan, Ragini, Blackburn, Alyssa, Colaric, Zane L., Theisen, Joshua W. M., Weisz, David, Dudchenko, Olga, Gnirke, Andreas, Rao, Suhas S. P., Kaur, Parwinder, Aiden, Erez Lieberman, Aiden, Aviva Presser
Publicado 2023

A Chromosome-Length Reference Genome for the Endangered Pacific Pocket Mouse Reveals Recent Inbreeding in a Historically Large Population

por Wilder, Aryn P, Dudchenko, Olga, Curry, Caitlin, Korody, Marisa, Turbek, Sheela P, Daly, Mark, Misuraca, Ann, Wang, Gaojianyong, Khan, Ruqayya, Weisz, David, Fronczek, Julie, Aiden, Erez Lieberman, Houck, Marlys L, Shier, Debra M, Ryder, Oliver A, Steiner, Cynthia C
Publicado 2022