PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies

por Akhter, Sajia, Aziz, Ramy K., Edwards, Robert A.
Publicado 2012

Phylogenomic Resolution of Paleozoic Divergences in Harvestmen (Arachnida, Opiliones) via Analysis of Next-Generation Transcriptome Data

por Hedin, Marshal, Starrett, James, Akhter, Sajia, Schönhofer, Axel L., Shultz, Jeffrey W.
Publicado 2012

Multidimensional metrics for estimating phage abundance, distribution, gene density, and sequence coverage in metagenomes

por Aziz, Ramy K., Dwivedi, Bhakti, Akhter, Sajia, Breitbart, Mya, Edwards, Robert A.
Publicado 2015

Applying Shannon's information theory to bacterial and phage genomes and metagenomes

por Akhter, Sajia, Bailey, Barbara A., Salamon, Peter, Aziz, Ramy K., Edwards, Robert A.
Publicado 2013

Kullback Leibler divergence in complete bacterial and phage genomes

por Akhter, Sajia, Aziz, Ramy K., Kashef, Mona T., Ibrahim, Eslam S., Bailey, Barbara, Edwards, Robert A.
Publicado 2017

Accessing the SEED Genome Databases via Web Services API: Tools for Programmers

por Disz, Terry, Akhter, Sajia, Cuevas, Daniel, Olson, Robert, Overbeek, Ross, Vonstein, Veronika, Stevens, Rick, Edwards, Robert A
Publicado 2010

Multivariate Analysis of Functional Metagenomes

por Dinsdale, Elizabeth A., Edwards, Robert A., Bailey, Barbara A., Tuba, Imre, Akhter, Sajia, McNair, Katelyn, Schmieder, Robert, Apkarian, Naneh, Creek, Michelle, Guan, Eric, Hernandez, Mayra, Isaacs, Katherine, Peterson, Chris, Regh, Todd, Ponomarenko, Vadim
Publicado 2013