Mining protein interactomes to improve their reliability and support the advancement of network medicine

por Alanis-Lobato, Gregorio
Publicado 2015

From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks

por Cannistraci, Carlo Vittorio, Alanis-Lobato, Gregorio, Ravasi, Timothy
Publicado 2013

Minimum curvilinearity to enhance topological prediction of protein interactions by network embedding

por Cannistraci, Carlo Vittorio, Alanis-Lobato, Gregorio, Ravasi, Timothy
Publicado 2013

Erratum: From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks

por Cannistraci, Carlo Vittorio, Alanis-Lobato, Gregorio, Ravasi, Timothy
Publicado 2015

The latent geometry of the human protein interaction network

por Alanis-Lobato, Gregorio, Mier, Pablo, Andrade-Navarro, Miguel
Publicado 2018

Efficient embedding of complex networks to hyperbolic space via their Laplacian

por Alanis-Lobato, Gregorio, Mier, Pablo, Andrade-Navarro, Miguel A.
Publicado 2016

Geometric characterisation of disease modules

por Härtner, Franziska, Andrade-Navarro, Miguel A., Alanis-Lobato, Gregorio
Publicado 2018

Manifold learning and maximum likelihood estimation for hyperbolic network embedding

por Alanis-Lobato, Gregorio, Mier, Pablo, Andrade-Navarro, Miguel A.
Publicado 2016

HIPPIE v2.0: enhancing meaningfulness and reliability of protein–protein interaction networks

por Alanis-Lobato, Gregorio, Andrade-Navarro, Miguel A., Schaefer, Martin H.
Publicado 2017

Assessing the reliability of gene expression measurements in very-low-numbers of human monocyte-derived macrophages

por Geiß, Carsten, Alanis-Lobato, Gregorio, Andrade-Navarro, Miguel, Régnier-Vigouroux, Anne
Publicado 2019

Highlighting nonlinear patterns in population genetics datasets

por Alanis-Lobato, Gregorio, Cannistraci, Carlo Vittorio, Eriksson, Anders, Manica, Andrea, Ravasi, Timothy
Publicado 2015

MIPPIE: the mouse integrated protein–protein interaction reference

por Alanis-Lobato, Gregorio, Möllmann, Jannik S, Schaefer, Martin H, Andrade-Navarro, Miguel A
Publicado 2020

CellMap visualizes protein-protein interactions and subcellular localization

por Dallago, Christian, Goldberg, Tatyana, Andrade-Navarro, Miguel Angel, Alanis-Lobato, Gregorio, Rost, Burkhard
Publicado 2018

Detection of condition-specific marker genes from RNA-seq data with MGFR

por El Amrani, Khadija, Alanis-Lobato, Gregorio, Mah, Nancy, Kurtz, Andreas, Andrade-Navarro, Miguel A.
Publicado 2019

Interaction profiling of RNA-binding ubiquitin ligases reveals a link between posttranscriptional regulation and the ubiquitin system

por Hildebrandt, Andrea, Alanis-Lobato, Gregorio, Voigt, Andrea, Zarnack, Kathi, Andrade-Navarro, Miguel A., Beli, Petra, König, Julian
Publicado 2017

Knowledge Graphs for Indication Expansion: An Explainable Target-Disease Prediction Method

por Gurbuz, Ozge, Alanis-Lobato, Gregorio, Picart-Armada, Sergio, Sun, Miao, Haslinger, Christian, Lawless, Nathan, Fernandez-Albert, Francesc
Publicado 2022

Evolutionary Study of Disorder in Protein Sequences

por Kastano, Kristina, Erdős, Gábor, Mier, Pablo, Alanis-Lobato, Gregorio, Promponas, Vasilis J., Dosztányi, Zsuzsanna, Andrade-Navarro, Miguel A.
Publicado 2020

The transcriptional co‐activator Yap1 promotes adult hippocampal neural stem cell activation

por Fan, Wenqiang, Jurado‐Arjona, Jerónimo, Alanis‐Lobato, Gregorio, Péron, Sophie, Berger, Christian, Andrade‐Navarro, Miguel A, Falk, Sven, Berninger, Benedikt
Publicado 2023

MICA: a multi-omics method to predict gene regulatory networks in early human embryos

por Alanis-Lobato, Gregorio, Bartlett, Thomas E, Huang, Qiulin, Simon, Claire S, McCarthy, Afshan, Elder, Kay, Snell, Phil, Christie, Leila, Niakan, Kathy K
Publicado 2023

Transdifferentiation of Mouse Embryonic Fibroblasts into Dopaminergic Neurons Reactivates LINE-1 Repetitive Elements

por Della Valle, Francesco, Thimma, Manjula P., Caiazzo, Massimiliano, Pulcrano, Salvatore, Celii, Mirko, Adroub, Sabir A., Liu, Peng, Alanis-Lobato, Gregorio, Broccoli, Vania, Orlando, Valerio
Publicado 2020