QTLminer: identifying genes regulating quantitative traits

por Alberts, Rudi, Schughart, Klaus
Publicado 2010

ZDOG: zooming in on dominating genes with mutations in cancer pathways

por Alberts, Rudi, Chen, Jinyu, Zhang, Louxin
Publicado 2019

Data-driven assessment of eQTL mapping methods

por Michaelson, Jacob J, Alberts, Rudi, Schughart, Klaus, Beyer, Andreas
Publicado 2010

Genome-wide analysis of the mouse lung transcriptome reveals novel molecular gene interaction networks and cell-specific expression signatures

por Alberts, Rudi, Lu, Lu, Williams, Robert W, Schughart, Klaus
Publicado 2011

Genome-wide analysis of the mouse lung transcriptome reveals novel molecular gene interaction networks and cell-specific expression signatures

por Alberts, Rudi, Lu, Lu, Williams, Robert W, Schughart, Klaus
Publicado 2012

Towards the integration of mouse databases - definition and implementation of solutions to two use-cases in mouse functional genomics

por Gruenberger, Michael, Alberts, Rudi, Smedley, Damian, Swertz, Morris, Schofield, Paul, Schughart, Klaus
Publicado 2010

Sequence Polymorphisms Cause Many False cis eQTLs

por Alberts, Rudi, Terpstra, Peter, Li, Yang, Breitling, Rainer, Nap, Jan-Peter, Jansen, Ritsert C.
Publicado 2007

Integration and Reanalysis of Four RNA-Seq Datasets Including BALF, Nasopharyngeal Swabs, Lung Biopsy, and Mouse Models Reveals Common Immune Features of COVID-19

por Alberts, Rudi, Chan, Sze Chun, Meng, Qian-Fang, He, Shan, Rao, Lang, Liu, Xindong, Zhang, Yongliang
Publicado 2022

ATR-FTIR spectroscopy reveals genomic loci regulating the tissue response in high fat diet fed BXD recombinant inbred mouse strains

por Dogan, Ayca, Lasch, Peter, Neuschl, Christina, Millrose, Marion K, Alberts, Rudi, Schughart, Klaus, Naumann, Dieter, Brockmann, Gudrun A
Publicado 2013

Distinct gene loci control the host response to influenza H1N1 virus infection in a time-dependent manner

por Nedelko, Tatiana, Kollmus, Heike, Klawonn, Frank, Spijker, Sabine, Lu, Lu, Heßman, Manuela, Alberts, Rudi, Williams, Robert W, Schughart, Klaus
Publicado 2012

A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

por Alberts, Rudi, Terpstra, Peter, Hardonk, Menno, Bystrykh, Leonid V, de Haan, Gerald, Breitling, Rainer, Nap, Jan-Peter, Jansen, Ritsert C
Publicado 2007

Expression QTL mapping in regulatory and helper T cells from the BXD family of strains reveals novel cell-specific genes, gene-gene interactions and candidate genes for auto-immune...

por Alberts, Rudi, Chen, Hairong, Pommerenke, Claudia, Smit, August B, Spijker, Sabine, Williams, Robert W, Geffers, Robert, Bruder, Dunja, Schughart, Klaus
Publicado 2011

Annexin-A1 deficiency attenuates stress-induced tumor growth via fatty acid metabolism in mice: an Integrated multiple omics analysis on the stress- microbiome-metabolite-epigeneti...

por Cui, Jianzhou, Sachaphibulkij, Karishma, Teo, Wen Shiun, Lim, Hong Meng, Zou, Li, Ong, Choon Nam, Alberts, Rudi, Chen, Jinmiao, Lim, Lina H. K.
Publicado 2022

Bioinformatics tools and database resources for systems genetics analysis in mice—a short review and an evaluation of future needs

por Durrant, Caroline, Swertz, Morris A., Alberts, Rudi, Arends, Danny, Möller, Steffen, Mott, Richard, Prins, Pjotr, van der Velde, K. Joeri, Jansen, Ritsert C., Schughart, Klaus
Publicado 2012

Systems Genetics of Liver Fibrosis: Identification of Fibrogenic and Expression Quantitative Trait Loci in the BXD Murine Reference Population

por Hall, Rabea A., Liebe, Roman, Hochrath, Katrin, Kazakov, Andrey, Alberts, Rudi, Laufs, Ulrich, Böhm, Michael, Fischer, Hans-Peter, Williams, Robert W., Schughart, Klaus, Weber, Susanne N., Lammert, Frank
Publicado 2014

XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments

por Swertz, Morris A, Velde, K Joeri van der, Tesson, Bruno M, Scheltema, Richard A, Arends, Danny, Vera, Gonzalo, Alberts, Rudi, Dijkstra, Martijn, Schofield, Paul, Schughart, Klaus, Hancock, John M, Smedley, Damian, Wolstencroft, Katy, Goble, Carole, de Brock, Engbert O, Jones, Andrew R, Parkinson, Helen E, Jansen, Ritsert C
Publicado 2010

MOLGENIS research: advanced bioinformatics data software for non-bioinformaticians

por van der Velde, K Joeri, Imhann, Floris, Charbon, Bart, Pang, Chao, van Enckevort, David, Slofstra, Mariska, Barbieri, Ruggero, Alberts, Rudi, Hendriksen, Dennis, Kelpin, Fleur, de Haan, Mark, de Boer, Tommy, Haakma, Sido, Stroomberg, Connor, Scholtens, Salome, van de Geijn, Gert-Jan, Festen, Eleonora A M, Weersma, Rinse K, Swertz, Morris A
Publicado 2019

Pooled Resequencing of 122 Ulcerative Colitis Genes in a Large Dutch Cohort Suggests Population-Specific Associations of Rare Variants in MUC2

por Visschedijk, Marijn C., Alberts, Rudi, Mucha, Soren, Deelen, Patrick, de Jong, Dirk J., Pierik, Marieke, Spekhorst, Lieke M., Imhann, Floris, van der Meulen-de Jong, Andrea E., van der Woude, C. Janneke, van Bodegraven, Adriaan A., Oldenburg, Bas, Löwenberg, Mark, Dijkstra, Gerard, Ellinghaus, David, Schreiber, Stefan, Wijmenga, Cisca, Rivas, Manuel A., Franke, Andre, van Diemen, Cleo C., Weersma, Rinse K.
Publicado 2016