Identification of Predictor Genes for Feed Efficiency in Beef Cattle by Applying Machine Learning Methods to Multi-Tissue Transcriptome Data

por Chen, Weihao, Alexandre, Pâmela A., Ribeiro, Gabriela, Fukumasu, Heidge, Sun, Wei, Reverter, Antonio, Li, Yutao
Publicado 2021

Systems Biology Reveals NR2F6 and TGFB1 as Key Regulators of Feed Efficiency in Beef Cattle

por Alexandre, Pâmela A., Naval-Sanchez, Marina, Porto-Neto, Laercio R., Ferraz, José Bento S., Reverter, Antonio, Fukumasu, Heidge
Publicado 2019

Dynamics of Gene Co-expression Networks in Time-Series Data: A Case Study in Drosophila melanogaster Embryogenesis

por Lau, Li Yieng, Reverter, Antonio, Hudson, Nicholas J., Naval-Sanchez, Marina, Fortes, Marina R. S., Alexandre, Pâmela A.
Publicado 2020

A gene co-association network regulating gut microbial communities in a Duroc pig population

por Reverter, Antonio, Ballester, Maria, Alexandre, Pamela A., Mármol-Sánchez, Emilio, Dalmau, Antoni, Quintanilla, Raquel, Ramayo-Caldas, Yuliaxis
Publicado 2021

Detection of potential functional variants based on systems-biology: the case of feed efficiency in beef cattle

por Ribeiro, Gabriela, Baldi, Fernando, Cesar, Aline S. M., Alexandre, Pâmela A., Peripolli, Elisa, Ferraz, José B. S., Fukumasu, Heidge
Publicado 2022

Chromatin accessibility and regulatory vocabulary across indicine cattle tissues

por Alexandre, Pâmela A., Naval-Sánchez, Marina, Menzies, Moira, Nguyen, Loan T., Porto-Neto, Laercio R., Fortes, Marina R. S., Reverter, Antonio
Publicado 2021

Bias, dispersion, and accuracy of genomic predictions for feedlot and carcase traits in Australian Angus steers

por Alexandre, Pâmela A., Li, Yutao, Hine, Brad C., Duff, Christian J., Ingham, Aaron B., Porto-Neto, Laercio R., Reverter, Antonio
Publicado 2021

Leveraging host-genetics and gut microbiota to determine immunocompetence in pigs

por Ramayo-Caldas, Yuliaxis, Zingaretti, Laura M., Pérez-Pascual, David, Alexandre, Pamela A., Reverter, Antonio, Dalmau, Antoni, Quintanilla, Raquel, Ballester, Maria
Publicado 2021

Correction to: Bias, dispersion, and accuracy of genomic predictions for feedlot and carcase traits in Australian Angus steers

por Alexandre, Pâmela A., Li, Yutao, Hine, Brad C., Duff, Christian J., Ingham, Aaron B., Porto-Neto, Laercio R., Reverter, Antonio
Publicado 2021

Exploring the Regulatory Potential of Long Non-Coding RNA in Feed Efficiency of Indicine Cattle

por Alexandre, Pâmela A., Reverter, Antonio, Berezin, Roberta B., Porto-Neto, Laercio R., Ribeiro, Gabriela, Santana, Miguel H. A., Ferraz, José Bento S., Fukumasu, Heidge
Publicado 2020

Genome-Wide Co-Expression Distributions as a Metric to Prioritize Genes of Functional Importance

por Alexandre, Pâmela A., Hudson, Nicholas J., Lehnert, Sigrid A., Fortes, Marina R. S., Naval-Sánchez, Marina, Nguyen, Loan T., Porto-Neto, Laercio R., Reverter, Antonio
Publicado 2020

An epigenetic screening determines BET proteins as targets to suppress self-renewal and tumorigenicity in canine mammary cancer cells

por Xavier, Pedro L. P., Cordeiro, Yonara G., Alexandre, Pâmela A., Pires, Pedro R. L., Saranholi, Bruno H., Silva, Edson R., Müller, Susanne, Fukumasu, Heidge
Publicado 2019

Identification of two molecular subtypes in canine mast cell tumours through gene expression profiling

por Pulz, Lidia H., Barra, Camila N., Alexandre, Pamela A., Huete, Greice C., Cadrobbi, Karine G., Nishiya, Adriana T., de Freitas, Silvio Henrique, Fukumasu, Heidge, Strefezzi, Ricardo F.
Publicado 2019

Liver proteomics unravel the metabolic pathways related to Feed Efficiency in beef cattle

por Fonseca, Leydiana D., Eler, Joanir P., Pereira, Mikaele A., Rosa, Alessandra F., Alexandre, Pâmela A., Moncau, Cristina T., Salvato, Fernanda, Rosa-Fernandes, Livia, Palmisano, Giuseppe, Ferraz, José B. S., Fukumasu, Heidge
Publicado 2019

RNA-Seq transcriptome analysis shows anti-tumor actions of melatonin in a breast cancer xenograft model

por Jardim-Perassi, Bruna Victorasso, Alexandre, Pâmela A., Sonehara, Nathalia M., de Paula-Junior, Rubens, Reis Júnior, Osvaldo, Fukumasu, Heidge, Chammas, Roger, Coutinho, Luiz Lehmann, Zuccari, Debora Aparecida Pires de Campos
Publicado 2019

Bovine NR1I3 gene polymorphisms and its association with feed efficiency traits in Nellore cattle

por Alexandre, Pâmela A., Gomes, Rodrigo C., Santana, Miguel H.A., Silva, Saulo L., Leme, Paulo R., Mudadu, Maurício A., Regitano, Luciana C.A., Meirelles, Flávio V., Ferraz, José B.S., Fukumasu, Heidge
Publicado 2014

Multi-breed genomic predictions and functional variants for fertility of tropical bulls

por Porto-Neto, Laercio R., Alexandre, Pamela A., Hudson, Nicholas J., Bertram, John, McWilliam, Sean M., Tan, Andre W. L., Fortes, Marina R. S., McGowan, Michael R., Hayes, Ben J., Reverter, Antonio
Publicado 2023

Liver transcriptomic networks reveal main biological processes associated with feed efficiency in beef cattle

por Alexandre, Pamela A., Kogelman, Lisette J. A., Santana, Miguel H. A., Passarelli, Danielle, Pulz, Lidia H., Fantinato-Neto, Paulo, Silva, Paulo L., Leme, Paulo R., Strefezzi, Ricardo F., Coutinho, Luiz L., Ferraz, José B. S., Eler, Joanie P., Kadarmideen, Haja N., Fukumasu, Heidge
Publicado 2015

Erratum to: Liver transcriptomic networks reveal main biological processes associated with feed efficiency in beef cattle

por Alexandre, Pamela A., Kogelman, Lisette J. A., Santana, Miguel H. A., Passarelli, Danielle, Pulz, Lidia H., Fantinato-Neto, Paulo, Silva, Saulo Luz, Leme, Paulo R., Strefezzi, Ricardo F., Coutinho, Luiz L., Ferraz, José B. S., Eler, Joanir P., Kadarmideen, Haja N., Fukumasu, Heidge
Publicado 2016

Genome-wide association analysis of feed intake and residual feed intake in Nellore cattle

por Santana, Miguel HA, Utsunomiya, Yuri T, Neves, Haroldo HR, Gomes, Rodrigo C, Garcia, José F, Fukumasu, Heidge, Silva, Saulo L, Oliveira Junior, Gerson A, Alexandre, Pâmela A, Leme, Paulo R, Brassaloti, Ricardo A, Coutinho, Luiz L, Lopes, Thiago G, Meirelles, Flávio V, Eler, Joanir P, Ferraz, José BS
Publicado 2014