Detecting protein variants by mass spectrometry: a comprehensive study in cancer cell-lines

por Alfaro, Javier A., Ignatchenko, Alexandr, Ignatchenko, Vladimir, Sinha, Ankit, Boutros, Paul C., Kislinger, Thomas
Publicado 2017

Interfaces with Structure Dynamics of the Workhorses from Cells Revealed through Cross-Linking Mass Spectrometry (CLMS)

por Kalathiya, Umesh, Padariya, Monikaben, Faktor, Jakub, Coyaud, Etienne, Alfaro, Javier A., Fahraeus, Robin, Hupp, Ted R., Goodlett, David R.
Publicado 2021

Unraveling the glycosylated immunopeptidome with HLA-Glyco

por Bedran, Georges, Polasky, Daniel A., Hsiao, Yi, Yu, Fengchao, da Veiga Leprevost, Felipe, Alfaro, Javier A., Cieslik, Marcin, Nesvizhskii, Alexey I.
Publicado 2023

Aberrant DNA methylation reprogramming during induced pluripotent stem cell generation is dependent on the choice of reprogramming factors

por Planello, Aline C, Ji, Junfeng, Sharma, Vivek, Singhania, Rajat, Mbabaali, Faridah, Müller, Fabian, Alfaro, Javier A, Bock, Christoph, De Carvalho, Daniel D, Batada, Nizar N
Publicado 2014

Kinomics platform using GBM tissue identifies BTK as being associated with higher patient survival

por Al Shboul, Sofian, Curran, Olimpia E, Alfaro, Javier A, Lickiss, Fiona, Nita, Erisa, Kowalski, Jacek, Naji, Faris, Nenutil, Rudolf, Ball, Kathryn L, Krejcir, Radovan, Vojtesek, Borivoj, Hupp, Ted R, Brennan, Paul M
Publicado 2021

MicroPOTS Analysis of Barrett’s Esophageal Cell Line Models Identifies Proteomic Changes after Physiologic and Radiation Stress

por Weke, Kenneth, Singh, Ashita, Uwugiaren, Naomi, Alfaro, Javier A., Wang, Tongjie, Hupp, Ted R., O’Neill, J. Robert, Vojtesek, Borek, Goodlett, David R., Williams, Sarah M., Zhou, Mowei, Kelly, Ryan T., Zhu, Ying, Dapic, Irena
Publicado 2021

The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I–Associated Peptides

por Bedran, Georges, Gasser, Hans-Christof, Weke, Kenneth, Wang, Tongjie, Bedran, Dominika, Laird, Alexander, Battail, Christophe, Zanzotto, Fabio Massimo, Pesquita, Catia, Axelson, Håkan, Rajan, Ajitha, Harrison, David J., Palkowski, Aleksander, Pawlik, Maciej, Parys, Maciej, O'Neill, J. Robert, Brennan, Paul M., Symeonides, Stefan N., Goodlett, David R., Litchfield, Kevin, Fahraeus, Robin, Hupp, Ted R., Kote, Sachin, Alfaro, Javier A.
Publicado 2023