Understanding the language of gene regulation

por Alkema, Wynand, Wasserman, Wyeth W
Publicado 2003

BioVenn – a web application for the comparison and visualization of biological lists using area-proportional Venn diagrams

por Hulsen, Tim, de Vlieg, Jacob, Alkema, Wynand
Publicado 2008

PhyloPat: an updated version of the phylogenetic pattern database contains gene neighborhood

por Hulsen, Tim, Groenen, Peter M. A., de Vlieg, Jacob, Alkema, Wynand
Publicado 2009

Microbial bioinformatics for food safety and production

por Alkema, Wynand, Boekhorst, Jos, Wels, Michiel, van Hijum, Sacha A. F. T.
Publicado 2016

Literature Mining for the Discovery of Hidden Connections between Drugs, Genes and Diseases

por Frijters, Raoul, van Vugt, Marianne, Smeets, Ruben, van Schaik, René, de Vlieg, Jacob, Alkema, Wynand
Publicado 2010

Clustering analyses in peptidomics revealed that peptide profiles of infant formulae are descriptive

por Lambers, Tim T, Gloerich, Jolein, van Hoffen, Els, Alkema, Wynand, Hondmann, Dirk H, van Tol, Eric AF
Publicado 2015

Fermentation-induced variation in heat and oxidative stress phenotypes of Lactococcus lactis MG1363 reveals transcriptome signatures for robustness

por Dijkstra, Annereinou R, Alkema, Wynand, Starrenburg, Marjo JC, Hugenholtz, Jeroen, van Hijum, Sacha AFT, Bron, Peter A
Publicado 2014

CoPub: a literature-based keyword enrichment tool for microarray data analysis

por Frijters, Raoul, Heupers, Bart, van Beek, Pieter, Bouwhuis, Maurice, van Schaik, René, de Vlieg, Jacob, Polman, Jan, Alkema, Wynand
Publicado 2008

Strain-Dependent Transcriptome Signatures for Robustness in Lactococcus lactis

por Dijkstra, Annereinou R., Alkema, Wynand, Starrenburg, Marjo J. C., Hugenholtz, Jeroen, van Hijum, Sacha A. F. T., Bron, Peter A.
Publicado 2016

Charting host-microbe co-metabolism in skin aging and application to metagenomics data

por Alkema, Wynand, Boekhorst, Jos, Eijlander, Robyn T., Schnittger, Steve, De Gruyter, Fini, Lukovac, Sabina, Schilling, Kurt, Kortman, Guus A. M.
Publicado 2021

CoPub update: CoPub 5.0 a text mining system to answer biological questions

por Fleuren, Wilco W. M., Verhoeven, Stefan, Frijters, Raoul, Heupers, Bart, Polman, Jan, van Schaik, René, de Vlieg, Jacob, Alkema, Wynand
Publicado 2011

ss-TEA: Entropy based identification of receptor specific ligand binding residues from a multiple sequence alignment of class A GPCRs

por Sanders, Marijn PA, Fleuren, Wilco WM, Verhoeven, Stefan, van den Beld, Sven, Alkema, Wynand, de Vlieg, Jacob, Klomp, Jan PG
Publicado 2011

Identification of new biomarker candidates for glucocorticoid induced insulin resistance using literature mining

por Fleuren, Wilco WM, Toonen, Erik JM, Verhoeven, Stefan, Frijters, Raoul, Hulsen, Tim, Rullmann, Ton, van Schaik, René, de Vlieg, Jacob, Alkema, Wynand
Publicado 2013

Assessing the metabolic effects of prednisolone in healthy volunteers using urine metabolic profiling

por Ellero-Simatos, Sandrine, Szymańska, Ewa, Rullmann, Ton, Dokter, Wim HA, Ramaker, Raymond, Berger, Ruud, van Iersel, Thijs MP, Smilde, Age K, Hankemeier, Thomas, Alkema, Wynand
Publicado 2012

Draft Genome Sequence of Lactobacillus delbrueckii subsp. bulgaricus LBB.B5

por Urshev, Zoltan, Hajo, Karima, Lenoci, Leonardo, Bron, Peter A., Dijkstra, Annereinou, Alkema, Wynand, Wels, Michiel, Siezen, Roland J., Minkova, Svetlana, van Hijum, Sacha A. F. T.
Publicado 2016

Prednisolone-induced differential gene expression in mouse liver carrying wild type or a dimerization-defective glucocorticoid receptor

por Frijters, Raoul, Fleuren, Wilco, Toonen, Erik JM, Tuckermann, Jan P, Reichardt, Holger M, van der Maaden, Hans, van Elsas, Andrea, van Lierop, Marie-Jose, Dokter, Wim, de Vlieg, Jacob, Alkema, Wynand
Publicado 2010

Molecular pathway profiling of T lymphocyte signal transduction pathways; Th1 and Th2 genomic fingerprints are defined by TCR and CD28-mediated signaling

por Smeets, Ruben L, Fleuren, Wilco WM, He, Xuehui, Vink, Paul M, Wijnands, Frank, Gorecka, Monika, Klop, Henri, Bauerschmidt, Sussane, Garritsen, Anja, Koenen, Hans JPM, Joosten, Irma, Boots, Annemieke MH, Alkema, Wynand
Publicado 2012

Magnesium deficiency prevents high-fat-diet-induced obesity in mice

por Kurstjens, Steef, van Diepen, Janna A., Overmars-Bos, Caro, Alkema, Wynand, Bindels, René J. M., Ashcroft, Frances M., Tack, Cees J. J., Hoenderop, Joost G. J., de Baaij, Jeroen H. F.
Publicado 2018

Prednisolone induces the Wnt signalling pathway in 3T3-L1 adipocytes

por Fleuren, Wilco W. M., Linssen, Margot M. L., Toonen, Erik J. M., van der Zon, Gerard C. M., Guigas, Bruno, de Vlieg, Jacob, Dokter, Wim H. A., Ouwens, D. Margriet, Alkema, Wynand
Publicado 2013

Differential Pneumococcal Growth Features in Severe Invasive Disease Manifestations

por Arends, Daan W., Alkema, Wynand, Hapsari Putri, Indri, van der Gaast–de Jongh, Christa E., Eleveld, Marc, Langereis, Jeroen D., de Mast, Quirijn, Meis, Jacques F., de Jonge, Marien I., Cremers, Amelieke J. H.
Publicado 2022