Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis

por Gupta, Aditi, Alland, David
Publicado 2021

Highly Sensitive Detection of Staphylococcus aureus Directly from Patient Blood

por Banada, Padmapriya P., Chakravorty, Soumitesh, Shah, Darshini, Burday, Michele, Mazzella, Fermina M., Alland, David
Publicado 2012

Inactivation of SARS-CoV-2 virus in saliva using a guanidium based transport medium suitable for RT-PCR diagnostic assays.

por Banik, Sukalyani, Saibire, Kaheerman, Suryavanshi, Shraddha, Johns, Glenn, Chakravorty, Soumitesh, Kwiatkowski, Robert, Alland, David, Banada, Padmapriya
Publicado 2021

A Simple RT-PCR Melting temperature Assay to Rapidly Screen for Widely Circulating SARS-CoV-2 Variants.

por Banada, Padmapriya, Green, Raquel, Banik, Sukalyani, Chopoorian, Abby, Streck, Deanna, Jones, Robert, Chakravorty, Soumitesh, Alland, David
Publicado 2021

A Simple Reverse Transcriptase PCR Melting-Temperature Assay To Rapidly Screen for Widely Circulating SARS-CoV-2 Variants

por Banada, Padmapriya, Green, Raquel, Banik, Sukalyani, Chopoorian, Abby, Streck, Deanna, Jones, Robert, Chakravorty, Soumitesh, Alland, David
Publicado 2021

Inactivation of SARS-CoV-2 virus in saliva using a guanidium based transport medium suitable for RT-PCR diagnostic assays

por Banik, Sukalyani, Saibire, Kaheerman, Suryavanshi, Shraddha, Johns, Glenn, Chakravorty, Soumitesh, Kwiatkowski, Robert, Alland, David, Banada, Padmapriya P.
Publicado 2021

Optimal Triage Test Characteristics to Improve the Cost-Effectiveness of the Xpert MTB/RIF Assay for TB Diagnosis: A Decision Analysis

por van’t Hoog, Anna H., Cobelens, Frank, Vassall, Anna, van Kampen, Sanne, Dorman, Susan E., Alland, David, Ellner, Jerrold
Publicado 2013

Comparative Evaluation of Sloppy Molecular Beacon and Dual-Labeled Probe Melting Temperature Assays to Identify Mutations in Mycobacterium tuberculosis Resulting in Rifampin, Fluor...

por Roh, Sandy S., Smith, Laura E., Lee, Jong Seok, Via, Laura E., Barry, Clifton E., Alland, David, Chakravorty, Soumitesh
Publicado 2015

The Structure of the Oligomerization Domain of Lsr2 from Mycobacterium tuberculosis Reveals a Mechanism for Chromosome Organization and Protection

por Summers, Emma L., Meindl, Kathrin, Usón, Isabel, Mitra, Alok K., Radjainia, Mazdak, Colangeli, Roberto, Alland, David, Arcus, Vickery L.
Publicado 2012

Origin and Dynamics of Mycobacterium tuberculosis Subpopulations That Predictably Generate Drug Tolerance and Resistance

por Sebastian, Jees, Thomas, Anooja, Levine, Carly, Shrestha, Riju, Levy, Shawn, Safi, Hassan, Pentakota, Sri Ram, Kumar, Pradeep, Alland, David
Publicado 2022

Sample collection and transport strategies to enhance yield, accessibility, and biosafety of COVID-19 RT-PCR testing

por Banada, Padmapriya, Elson, David, Daivaa, Naranjargal, Park, Claire, Desind, Samuel, Montalvan, Ibsen, Kwiatkowski, Robert, Chakravorty, Soumitesh, Alland, David, Xie, Yingda L.
Publicado 2021

Whole Genome Sequencing of Mycobacterium tuberculosis Reveals Slow Growth and Low Mutation Rates during Latent Infections in Humans

por Colangeli, Roberto, Arcus, Vic L., Cursons, Ray T., Ruthe, Ali, Karalus, Noel, Coley, Kathy, Manning, Shannon D., Kim, Soyeon, Marchiano, Emily, Alland, David
Publicado 2014

Clinical Utility of a Novel Molecular Assay in Various Combination Strategies with Existing Methods for Diagnosis of HIV-Related Tuberculosis in Uganda

por Ssengooba, Willy, Nakiyingi, Lydia, Armstrong, Derek T., Cobelens, Frank G., Alland, David, Manabe, Yukari C., Dorman, Susan E., Ellner, Jerrold J., Joloba, Moses L.
Publicado 2014

A Novel Sample Processing Method for Rapid Detection of Tuberculosis in the Stool of Pediatric Patients Using the Xpert MTB/RIF Assay

por Banada, Padmapriya P., Naidoo, Uvistra, Deshpande, Srinidhi, Karim, Farina, Flynn, JoAnne L., O’Malley, Melanie, Jones, Martin, Nanassy, Oliver, Jeena, Prakash, Alland, David
Publicado 2016

Mycothiol biosynthesis is essential for ethionamide susceptibility in Mycobacterium tuberculosis

por Vilchèze, Catherine, Av-Gay, Yossef, Attarian, Rodgoun, Liu, Zhen, Hazbón, Manzour H, Colangeli, Roberto, Chen, Bing, Liu, Weijun, Alland, David, Sacchettini, James C, Jacobs, William R
Publicado 2008

Evaluation of Xpert MTB/RIF for Detection of Tuberculosis from Blood Samples of HIV-Infected Adults Confirms Mycobacterium tuberculosis Bacteremia as an Indicator of Poor Prognosis

por Feasey, Nicholas A., Banada, Padmapriya P., Howson, William, Sloan, Derek J., Mdolo, Aaron, Boehme, Catharina, Chipungu, Geoffrey A., Allain, Theresa J., Heyderman, Robert S., Corbett, Elizabeth L., Alland, David
Publicado 2013

Discordance of Tuberculin Skin Test and Interferon Gamma Release Assay in Recently Exposed Household Contacts of Pulmonary TB Cases in Brazil

por Ribeiro-Rodrigues, Rodrigo, Kim, Soyeon, Coelho da Silva, Flávia Dias, Uzelac, Aleksandra, Collins, Lauren, Palaci, Moíses, Alland, David, Dietze, Reynaldo, Ellner, Jerrold J., Jones-López, Edward, Salgame, Padmini
Publicado 2014

Transmission phenotype of Mycobacterium tuberculosis strains is mechanistically linked to induction of distinct pulmonary pathology

por Verma, Sheetal, Bhatt, Kamlesh, Lovey, Arianne, Ribeiro-Rodrigues, Rodrigo, Durbin, Joan, Jones-López, Edward C., Palaci, Moises, Vinhas, Solange A., Alland, David, Dietze, Reynaldo, Ellner, Jerrold J., Salgame, Padmini
Publicado 2019

Mycobacterium tuberculosis ecology in Venezuela: epidemiologic correlates of common spoligotypes and a large clonal cluster defined by MIRU-VNTR-24

por Abadía, Edgar, Sequera, Monica, Ortega, Dagmarys, Méndez, María Victoria, Escalona, Arnelly, Da Mata, Omaira, Izarra, Elix, Rojas, Yeimy, Jaspe, Rossana, Motiwala, Alifiya S, Alland, David, de Waard, Jacobus, Takiff, Howard E
Publicado 2009

A comprehensive update to the Mycobacterium tuberculosis H37Rv reference genome

por Chitale, Poonam, Lemenze, Alexander D., Fogarty, Emily C., Shah, Avi, Grady, Courtney, Odom-Mabey, Aubrey R., Johnson, W. Evan, Yang, Jason H., Eren, A. Murat, Brosch, Roland, Kumar, Pradeep, Alland, David
Publicado 2022