Statistical compression of protein sequences and inference of marginal probability landscapes over competing alignments using finite state models and Dirichlet priors

por Sumanaweera, Dinithi, Allison, Lloyd, Konagurthu, Arun S
Publicado 2019

Bridging the gaps in statistical models of protein alignment

por Sumanaweera, Dinithi, Allison, Lloyd, Konagurthu, Arun S
Publicado 2022

Minimum message length inference of secondary structure from protein coordinate data

por Konagurthu, Arun S., Lesk, Arthur M., Allison, Lloyd
Publicado 2012

A genome alignment algorithm based on compression

por Cao, Minh Duc, Dix, Trevor I, Allison, Lloyd
Publicado 2010

Piecewise linear approximation of protein structures using the principle of minimum message length

por Konagurthu, Arun S., Allison, Lloyd, Stuckey, Peter J., Lesk, Arthur M.
Publicado 2011

Comparative analysis of long DNA sequences by per element information content using different contexts

por Dix, Trevor I, Powell, David R, Allison, Lloyd, Bernal, Julie, Jaeger, Samira, Stern, Linda
Publicado 2007

A new statistical framework to assess structural alignment quality using information compression

por Collier, James H., Allison, Lloyd, Lesk, Arthur M., Garcia de la Banda, Maria, Konagurthu, Arun S.
Publicado 2014

Getting ‘ϕψχal’ with proteins: minimum message length inference of joint distributions of backbone and sidechain dihedral angles

por Amarasinghe, Piyumi R, Allison, Lloyd, Stuckey, Peter J, Garcia de la Banda, Maria, Lesk, Arthur M, Konagurthu, Arun S
Publicado 2023

Universal Architectural Concepts Underlying Protein Folding Patterns

por Konagurthu, Arun S., Subramanian, Ramanan, Allison, Lloyd, Abramson, David, Stuckey, Peter J., Garcia de la Banda, Maria, Lesk, Arthur M.
Publicado 2021

On the reliability and the limits of inference of amino acid sequence alignments

por Rajapaksa, Sandun, Sumanaweera, Dinithi, Lesk, Arthur M, Allison, Lloyd, Stuckey, Peter J, Garcia de la Banda, Maria, Abramson, David, Konagurthu, Arun S
Publicado 2022