Semantic Disease Gene Embeddings (SmuDGE): phenotype-based disease gene prioritization without phenotypes

by Alshahrani, Mona, Hoehndorf, Robert
Published 2018

Assessing the Outcome of Adult Kidney Transplantation from a Deceased Expanded Criteria Donor: A Descriptive Study

by Alshahrani, Mona, Alotaibi, Mutlaq, Bhutto, Burhan
Published 2020

Building predictive models for MERS-CoV infections using data mining techniques

by Al-Turaiki, Isra, Alshahrani, Mona, Almutairi, Tahani
Published 2016

Application and evaluation of knowledge graph embeddings in biomedical data

by Alshahrani, Mona, Thafar, Maha A., Essack, Magbubah
Published 2021

Affinity2Vec: drug-target binding affinity prediction through representation learning, graph mining, and machine learning

by Thafar, Maha A., Alshahrani, Mona, Albaradei, Somayah, Gojobori, Takashi, Essack, Magbubah, Gao, Xin
Published 2022

OncoRTT: Predicting novel oncology-related therapeutic targets using BERT embeddings and omics features

by Thafar, Maha A., Albaradei, Somayah, Uludag, Mahmut, Alshahrani, Mona, Gojobori, Takashi, Essack, Magbubah, Gao, Xin
Published 2023

Neuro-symbolic representation learning on biological knowledge graphs

by Alshahrani, Mona, Khan, Mohammad Asif, Maddouri, Omar, Kinjo, Akira R, Queralt-Rosinach, Núria, Hoehndorf, Robert
Published 2017

Combining biomedical knowledge graphs and text to improve predictions for drug-target interactions and drug-indications

by Alshahrani, Mona, Almansour, Abdullah, Alkhaldi, Asma, Thafar, Maha A., Uludag, Mahmut, Essack, Magbubah, Hoehndorf, Robert
Published 2022

The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of vascular plants

by Hoehndorf, Robert, Alshahrani, Mona, Gkoutos, Georgios V., Gosline, George, Groom, Quentin, Hamann, Thomas, Kattge, Jens, de Oliveira, Sylvia Mota, Schmidt, Marco, Sierra, Soraya, Smets, Erik, Vos, Rutger A., Weiland, Claus
Published 2016