Genome Wide Phosphoproteome Analysis of Zymomonas mobilis Under Anaerobic, Aerobic, and N(2)-Fixing Conditions

por Tatli, Mehmet, Hebert, Alexander S., Coon, Joshua J., Amador-Noguez, Daniel
Publicado 2019

Efficiency of Lactiplantibacillus plantarum JT-PN39 and Paenibacillus motobuensis JT-A29 for Fermented Coffee Applications and Fermented Coffee Characteristics

por Ngamnok, Teerawat, Nimlamool, Wutigri, Amador-Noguez, Daniel, Palaga, Tanapat, Meerak, Jomkhwan
Publicado 2023

Intestinal Microbiota Composition Modulates Choline Bioavailability from Diet and Accumulation of the Proatherogenic Metabolite Trimethylamine-N-Oxide

por Romano, Kymberleigh A., Vivas, Eugenio I., Amador-Noguez, Daniel, Rey, Federico E.
Publicado 2015

Identification of Unanticipated and Novel N-Acyl L-Homoserine Lactones (AHLs) Using a Sensitive Non-Targeted LC-MS/MS Method

por Patel, Nishaben M., Moore, Joseph D., Blackwell, Helen E., Amador-Noguez, Daniel
Publicado 2016

Comprehensive quantitation of metabolite concentrations, gross reaction fluxes, and reaction free energies across cells from four organisms

por Park, Junyoung, Rubin, Sara, Xu, Yi-Fan, Amador-Noguez, Daniel, Fan, Jing, Rabinowitz, Joshua
Publicado 2014

Few Differences in Metabolic Network Use Found Between Salmonella enterica Colonization of Plants and Typhoidal Mice

por Kwan, Grace, Plagenz, Brett, Cowles, Kimberly, Pisithkul, Tippapha, Amador-Noguez, Daniel, Barak, Jeri D.
Publicado 2018

Small Alarmone Synthetase SasA Expression Leads to Concomitant Accumulation of pGpp, ppApp, and AppppA in Bacillus subtilis

por Fung, Danny K., Yang, Jin, Stevenson, David M., Amador-Noguez, Daniel, Wang, Jue D.
Publicado 2020

Listeria monocytogenes requires DHNA-dependent intracellular redox homeostasis facilitated by Ndh2 for survival and virulence

por Smith, Hans B., Lee, Kijeong, Stevenson, David M., Amador-Noguez, Daniel, Sauer, John-Demian
Publicado 2023

Ultrasensitive regulation of anapleurosis via allosteric activation of PEP carboxylase

por Xu, Yi-Fan, Amador-Noguez, Daniel, Reaves, Marshall Louis, Feng, Xiao-Jiang, Rabinowitz, Joshua D.
Publicado 2012

Phenolic Amides Are Potent Inhibitors of De Novo Nucleotide Biosynthesis

por Pisithkul, Tippapha, Jacobson, Tyler B., O'Brien, Thomas J., Stevenson, David M., Amador-Noguez, Daniel
Publicado 2015

Different Functions of Phylogenetically Distinct Bacterial Complex I Isozymes

por Spero, Melanie A., Brickner, Joshua R., Mollet, Jordan T., Pisithkul, Tippapha, Amador-Noguez, Daniel, Donohue, Timothy J.
Publicado 2016

Expression of Phosphofructokinase Is Not Sufficient to Enable Embden-Meyerhof-Parnas Glycolysis in Zymomonas mobilis ZM4

por Felczak, Magdalena M., Jacobson, Tyler B., Ong, Wai Kit, Amador-Noguez, Daniel, TerAvest, Michaela A.
Publicado 2019

Steady-State Metabolite Concentrations Reflect a Balance between Maximizing Enzyme Efficiency and Minimizing Total Metabolite Load

por Tepper, Naama, Noor, Elad, Amador-Noguez, Daniel, Haraldsdóttir, Hulda S., Milo, Ron, Rabinowitz, Josh, Liebermeister, Wolfram, Shlomi, Tomer
Publicado 2013

Exogenous butyrate inhibits butyrogenic metabolism and alters expression of virulence genes in Clostridioides difficile

por Pensinger, Daniel A., Dobrila, Horia A., Stevenson, David M., Davis, Nicole M., Amador-Noguez, Daniel, Hryckowian, Andrew J.
Publicado 2023

Metabolite concentrations, fluxes, and free energies imply efficient enzyme usage

por Park, Junyoung O., Rubin, Sara A., Xu, Yi-Fan, Amador-Noguez, Daniel, Fan, Jing, Shlomi, Tomer, Rabinowitz, Joshua D.
Publicado 2016

Negative interactions determine Clostridioides difficile growth in synthetic human gut communities

por Hromada, Susan, Qian, Yili, Jacobson, Tyler B, Clark, Ryan L, Watson, Lauren, Safdar, Nasia, Amador‐Noguez, Daniel, Venturelli, Ophelia S
Publicado 2021

Systems-Level Analysis of Oxygen Exposure in Zymomonas mobilis: Implications for Isoprenoid Production

por Martien, Julia I., Hebert, Alexander S., Stevenson, David M., Regner, Matthew R., Khana, Daven B., Coon, Joshua J., Amador-Noguez, Daniel
Publicado 2019

The nucleotide pGpp acts as a third alarmone in Bacillus, with functions distinct from those of (p)ppGpp

por Yang, Jin, Anderson, Brent W., Turdiev, Asan, Turdiev, Husan, Stevenson, David M., Amador-Noguez, Daniel, Lee, Vincent T., Wang, Jue D.
Publicado 2020

Metabolic Fluxes of Nitrogen and Pyrophosphate in Chemostat Cultures of Clostridium thermocellum and Thermoanaerobacterium saccharolyticum

por Holwerda, Evert K., Zhou, Jilai, Hon, Shuen, Stevenson, David M., Amador-Noguez, Daniel, Lynd, Lee R., van Dijken, Johannes P.
Publicado 2020

Design of synthetic human gut microbiome assembly and butyrate production

por Clark, Ryan L., Connors, Bryce M., Stevenson, David M., Hromada, Susan E., Hamilton, Joshua J., Amador-Noguez, Daniel, Venturelli, Ophelia S.
Publicado 2021