Increased acquired protease inhibitor drug resistance mutations in minor HIV-1 quasispecies from infected patients suspected of failing on national second-line therapy in South Afr...

por Obasa, Adetayo Emmanuel, Ambikan, Anoop T., Gupta, Soham, Neogi, Ujjwal, Jacobs, Graeme Brendon
Publicado 2021

Molecular Characterization and Comparative Genomics of Clinical Hybrid Shiga Toxin-Producing and Enterotoxigenic Escherichia coli (STEC/ETEC) Strains in Sweden

por Bai, Xiangning, Zhang, Ji, Ambikan, Anoop, Jernberg, Cecilia, Ehricht, Ralf, Scheutz, Flemming, Xiong, Yanwen, Matussek, Andreas
Publicado 2019

Proteomic landscape of astrocytes and pericytes infected with HIV/SARS-CoV-2 mono/co-infection, impacting on neurological complications

por Acharya, Arpan, Ambikan, Anoop T, Thurman, Michellie, Malik, Mohid Reza, Dyavar, Shetty Ravi, Végvári, Ákos, Neogi, Ujjwal, Byrareddy, Siddappa N
Publicado 2023

Transcriptomics and Targeted Proteomics Analysis to Gain Insights Into the Immune-control Mechanisms of HIV-1 Infected Elite Controllers

por Zhang, Wang, Ambikan, Anoop T., Sperk, Maike, van Domselaar, Robert, Nowak, Piotr, Noyan, Kajsa, Russom, Aman, Sönnerborg, Anders, Neogi, Ujjwal
Publicado 2017

MiDRMpol: A High-Throughput Multiplexed Amplicon Sequencing Workflow to Quantify HIV-1 Drug Resistance Mutations against Protease, Reverse Transcriptase, and Integrase Inhibitors

por Aralaguppe, Shambhu G., Ambikan, Anoop T., Ashokkumar, Manickam, Kumar, Milner M., Hanna, Luke Elizabeth, Amogne, Wondwossen, Sönnerborg, Anders, Neogi, Ujjwal
Publicado 2019

Genome-scale metabolic models for natural and long-term drug-induced viral control in HIV infection

por Ambikan, Anoop T, Svensson-Akusjärvi, Sara, Krishnan, Shuba, Sperk, Maike, Nowak, Piotr, Vesterbacka, Jan, Sönnerborg, Anders, Benfeitas, Rui, Neogi, Ujjwal
Publicado 2022

Distinct lipid profile, low-level inflammation, and increased antioxidant defense signature in HIV-1 elite control status

por Sperk, Maike, Mikaeloff, Flora, Svensson-Akusjärvi, Sara, Krishnan, Shuba, Ponnan, Sivasankaran Munusamy, Ambikan, Anoop T., Nowak, Piotr, Sönnerborg, Anders, Neogi, Ujjwal
Publicado 2021

Plasma Metabolic Signature and Abnormalities in HIV-Infected Individuals on Long-Term Successful Antiretroviral Therapy

por Babu, Hemalatha, Sperk, Maike, Ambikan, Anoop T., Rachel, Gladys, Viswanathan, Vinod Kumar, Tripathy, Srikanth P., Nowak, Piotr, Hanna, Luke Elizabeth, Neogi, Ujjwal
Publicado 2019

Role of myeloid cells in system-level immunometabolic dysregulation during prolonged successful HIV-1 treatment

por Svensson Akusjärvi, Sara, Krishnan, Shuba, Ambikan, Anoop T., Mikaeloff, Flora, Munusamy Ponnan, Sivasankaran, Vesterbacka, Jan, Lourda, Magda, Nowak, Piotr, Sönnerborg, Anders, Neogi, Ujjwal
Publicado 2023

Feasibility of Known RNA Polymerase Inhibitors as Anti-SARS-CoV-2 Drugs

por Neogi, Ujjwal, Hill, Kyle J., Ambikan, Anoop T, Heng, Xiao, Quinn, Thomas P., Byrareddy, Siddappa N., Sönnerborg, Anders, Sarafianos, Stefan G., Singh, Kamal
Publicado 2020

Genomic Insights Into Clinical Shiga Toxin-Producing Escherichia coli Strains: A 15-Year Period Survey in Jönköping, Sweden

por Bai, Xiangning, Zhang, Ji, Hua, Ying, Jernberg, Cecilia, Xiong, Yanwen, French, Nigel, Löfgren, Sture, Hedenström, Ingela, Ambikan, Anoop, Mernelius, Sara, Matussek, Andreas
Publicado 2021

Integrative proteo-transcriptomic and immunophenotyping signatures of HIV-1 elite control phenotype: A cross-talk between glycolysis and HIF signaling

por Akusjärvi, Sara Svensson, Ambikan, Anoop T., Krishnan, Shuba, Gupta, Soham, Sperk, Maike, Végvári, Ákos, Mikaeloff, Flora, Healy, Katie, Vesterbacka, Jan, Nowak, Piotr, Sönnerborg, Anders, Neogi, Ujjwal
Publicado 2021

Peripheral blood CD4(+)CCR6(+) compartment differentiates HIV-1 infected or seropositive elite controllers from long-term successfully treated individuals

por Svensson Akusjärvi, Sara, Krishnan, Shuba, Jütte, Bianca B., Ambikan, Anoop T., Gupta, Soham, Rodriguez, Jimmy Esneider, Végvári, Ákos, Sperk, Maike, Nowak, Piotr, Vesterbacka, Jan, Svensson, J. Peter, Sönnerborg, Anders, Neogi, Ujjwal
Publicado 2022

Effects of the Antimicrobial Peptide LL-37 and Innate Effector Mechanisms in Colistin-Resistant Klebsiella pneumoniae With mgrB Insertions

por Al-Farsi, Hissa M., Al-Adwani, Salma, Ahmed, Sultan, Vogt, Carmen, Ambikan, Anoop T., Leber, Anna, Al-Jardani, Amina, Al-Azri, Saleh, Al-Muharmi, Zakariya, Toprak, Muhammet S., Giske, Christian G., Bergman, Peter
Publicado 2019

Dysregulation in Akt/mTOR/HIF-1 signaling identified by proteo-transcriptomics of SARS-CoV-2 infected cells

por Appelberg, Sofia, Gupta, Soham, Svensson Akusjärvi, Sara, Ambikan, Anoop T., Mikaeloff, Flora, Saccon, Elisa, Végvári, Ákos, Benfeitas, Rui, Sperk, Maike, Ståhlberg, Marie, Krishnan, Shuba, Singh, Kamal, Penninger, Josef M., Mirazimi, Ali, Neogi, Ujjwal
Publicado 2020

Systemic Inflammation and the Increased Risk of Inflamm-Aging and Age-Associated Diseases in People Living With HIV on Long Term Suppressive Antiretroviral Therapy

por Babu, Hemalatha, Ambikan, Anoop T., Gabriel, Erin E., Svensson Akusjärvi, Sara, Palaniappan, Alangudi Natarajan, Sundaraj, Vijila, Mupanni, Naveen Reddy, Sperk, Maike, Cheedarla, Narayanaiah, Sridhar, Rathinam, Tripathy, Srikanth P., Nowak, Piotr, Hanna, Luke Elizabeth, Neogi, Ujjwal
Publicado 2019

Impact of Long COVID on health and quality of life

por O’ Mahony, Liam, Buwalda, Tanja, Blair, Matthew, Forde, Brian, Lunjani, Nonhlanhla, Ambikan, Anoop, Neogi, Ujjwal, Barrett, Peter, Geary, Eoin, O'Connor, Nuala, Dineen, Jennifer, Clarke, Gerard, Kelleher, Eric, Horgan, Mary, Jackson, Arthur, Sadlier, Corinna
Publicado 2022

Systems-level temporal immune-metabolic profile in Crimean-Congo hemorrhagic fever virus infection

por Ambikan, Anoop T., Elaldi, Nazif, Svensson-Akusjärvi, Sara, Bagci, Binnur, Pektas, Ayse Nur, Hewson, Roger, Bagci, Gokhan, Arasli, Mehmet, Appelberg, Sofia, Mardinoglu, Adil, Sood, Vikas, Végvári, Ákos, Benfeitas, Rui, Gupta, Soham, Cetin, Ilhan, Mirazimi, Ali, Neogi, Ujjwal
Publicado 2023

Multi-omics insights into host-viral response and pathogenesis in Crimean-Congo hemorrhagic fever viruses for novel therapeutic target

por Neogi, Ujjwal, Elaldi, Nazif, Appelberg, Sofia, Ambikan, Anoop, Kennedy, Emma, Dowall, Stuart, Bagci, Binnur K, Gupta, Soham, Rodriguez, Jimmy E, Svensson-Akusjärvi, Sara, Monteil, Vanessa, Vegvari, Akos, Benfeitas, Rui, Banerjea, Akhil, Weber, Friedemann, Hewson, Roger, Mirazimi, Ali
Publicado 2022

Multi-omics personalized network analyses highlight progressive disruption of central metabolism associated with COVID-19 severity

por Ambikan, Anoop T., Yang, Hong, Krishnan, Shuba, Svensson Akusjärvi, Sara, Gupta, Soham, Lourda, Magda, Sperk, Maike, Arif, Muhammad, Zhang, Cheng, Nordqvist, Hampus, Ponnan, Sivasankaran Munusamy, Sönnerborg, Anders, Treutiger, Carl Johan, O’Mahony, Liam, Mardinoglu, Adil, Benfeitas, Rui, Neogi, Ujjwal
Publicado 2022