Beyond the Genome: genomics research ten years after the human genome sequence

por Casto, Amanda M, Amid, Clara
Publicado 2010

Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome

por Amid, Clara, Rehaume, Linda M, Brown, Kelly L, Gilbert, James GR, Dougan, Gordon, Hancock, Robert EW, Harrow, Jennifer L
Publicado 2009

Accelerating surveillance and research of antimicrobial resistance – an online repository for sharing of antimicrobial susceptibility data associated with whole-genome sequences

por Matamoros, Sébastien, Hendriksen, Rene S., Pataki, Bálint Ármin, Pakseresht, Nima, Rossello, Marc, Silvester, Nicole, Amid, Clara, Aarestrup, Frank M., Koopmans, Marion, Cochrane, Guy, Csabai, Istvan, Lund, Ole, Schultsz, Constance
Publicado 2020

From identification to validation to gene count

por Amid, Clara, Frankish, Adam, Aken, Bronwen, Ezkurdia, Iakes, Kokocinsk, Felix, Gilbert, James, White, Simon, Carninci, Piero, Gingeras, Thomas, Guigo, Roderic, Searle, Steve, Tress, Michael L, Harrow, Jennifer, Hubbard, Tim
Publicado 2010

Value, but high costs in post-deposition data curation

por ten Hoopen, Petra, Amid, Clara, Luigi Buttigieg, Pier, Pafilis, Evangelos, Bravakos, Panos, Cerdeño-Tárraga, Ana M., Gibson, Richard, Kahlke, Tim, Legaki, Aglaia, Narayana Murthy, Kada, Papastefanou, Gabriella, Pereira, Emiliano, Rossello, Marc, Luisa Toribio, Ana, Cochrane, Guy
Publicado 2016

Comparison of sequencing methods and data processing pipelines for whole genome sequencing and minority single nucleotide variant (mSNV) analysis during an influenza A/H5N8 outbrea...

por Poen, Marjolein J., Pohlmann, Anne, Amid, Clara, Bestebroer, Theo M., Brookes, Sharon M., Brown, Ian H., Everett, Helen, Schapendonk, Claudia M. E., Scheuer, Rachel D., Smits, Saskia L., Beer, Martin, Fouchier, Ron A. M., Ellis, Richard J.
Publicado 2020

EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies

por Mitchell, Alex L, Scheremetjew, Maxim, Denise, Hubert, Potter, Simon, Tarkowska, Aleksandra, Qureshi, Matloob, Salazar, Gustavo A, Pesseat, Sebastien, Boland, Miguel A, Hunter, Fiona M I, ten Hoopen, Petra, Alako, Blaise, Amid, Clara, Wilkinson, Darren J, Curtis, Thomas P, Cochrane, Guy, Finn, Robert D
Publicado 2018

Biocuration of functional annotation at the European nucleotide archive

por Gibson, Richard, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Goodgame, Neil, ten Hoopen, Petra, Jayathilaka, Suran, Kay, Simon, Leinonen, Rasko, Liu, Xin, Pallreddy, Swapna, Pakseresht, Nima, Rajan, Jeena, Rosselló, Marc, Silvester, Nicole, Smirnov, Dmitriy, Toribio, Ana Luisa, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado 2016

Content discovery and retrieval services at the European Nucleotide Archive

por Silvester, Nicole, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, ten Hoopen, Petra, Kay, Simon, Leinonen, Rasko, Li, Weizhong, Liu, Xin, Lopez, Rodrigo, Pakseresht, Nima, Pallreddy, Swapna, Plaister, Sheila, Radhakrishnan, Rajesh, Rossello, Marc, Senf, Alexander, Smirnov, Dmitriy, Toribio, Ana Luisa, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado 2014

The European Nucleotide Archive in 2017

por Silvester, Nicole, Alako, Blaise, Amid, Clara, Cerdeño-Tarrága, Ana, Clarke, Laura, Cleland, Iain, Harrison, Peter W, Jayathilaka, Suran, Kay, Simon, Keane, Thomas, Leinonen, Rasko, Liu, Xin, Martínez-Villacorta, Josué, Menchi, Manuela, Reddy, Kethi, Pakseresht, Nima, Rajan, Jeena, Rossello, Marc, Smirnov, Dmitriy, Toribio, Ana L, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado 2018

European Nucleotide Archive in 2016

por Toribio, Ana Luisa, Alako, Blaise, Amid, Clara, Cerdeño-Tarrága, Ana, Clarke, Laura, Cleland, Iain, Fairley, Susan, Gibson, Richard, Goodgame, Neil, ten Hoopen, Petra, Jayathilaka, Suran, Kay, Simon, Leinonen, Rasko, Liu, Xin, Martínez-Villacorta, Josué, Pakseresht, Nima, Rajan, Jeena, Reddy, Kethi, Rosello, Marc, Silvester, Nicole, Smirnov, Dmitriy, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado 2017

The European Nucleotide Archive in 2018

por Harrison, Peter W, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Holt, Sam, Hussein, Abdulrahman, Jayathilaka, Suran, Kay, Simon, Keane, Thomas, Leinonen, Rasko, Liu, Xin, Martínez-Villacorta, Josué, Milano, Annalisa, Pakseresht, Nima, Rajan, Jeena, Reddy, Kethi, Richards, Edward, Rosello, Marc, Silvester, Nicole, Smirnov, Dmitriy, Toribio, Ana-Luisa, Vijayaraja, Senthilnathan, Cochrane, Guy
Publicado 2019

Major submissions tool developments at the European nucleotide archive

por Amid, Clara, Birney, Ewan, Bower, Lawrence, Cerdeño-Tárraga, Ana, Cheng, Ying, Cleland, Iain, Faruque, Nadeem, Gibson, Richard, Goodgame, Neil, Hunter, Christopher, Jang, Mikyung, Leinonen, Rasko, Liu, Xin, Oisel, Arnaud, Pakseresht, Nima, Plaister, Sheila, Radhakrishnan, Rajesh, Reddy, Kethi, Rivière, Stephane, Rossello, Marc, Senf, Alexander, Smirnov, Dimitriy, Ten Hoopen, Petra, Vaughan, Daniel, Vaughan, Robert, Zalunin, Vadim, Cochrane, Guy
Publicado 2012

The European Nucleotide Archive in 2019

por Amid, Clara, Alako, Blaise T F, Balavenkataraman Kadhirvelu, Vishnukumar, Burdett, Tony, Burgin, Josephine, Fan, Jun, Harrison, Peter W, Holt, Sam, Hussein, Abdulrahman, Ivanov, Eugene, Jayathilaka, Suran, Kay, Simon, Keane, Thomas, Leinonen, Rasko, Liu, Xin, Martinez-Villacorta, Josue, Milano, Annalisa, Pakseresht, Amir, Rahman, Nadim, Rajan, Jeena, Reddy, Kethi, Richards, Edward, Smirnov, Dmitriy, Sokolov, Alexey, Vijayaraja, Senthilnathan, Cochrane, Guy
Publicado 2020

Metagenomics-Based Proficiency Test of Smoked Salmon Spiked with a Mock Community

por Sala, Claudia, Mordhorst, Hanne, Grützke, Josephine, Brinkmann, Annika, Petersen, Thomas N., Poulsen, Casper, Cotter, Paul D., Crispie, Fiona, Ellis, Richard J., Castellani, Gastone, Amid, Clara, Hakhverdyan, Mikhayil, Guyader, Soizick Le, Manfreda, Gerardo, Mossong, Joël, Nitsche, Andreas, Ragimbeau, Catherine, Schaeffer, Julien, Schlundt, Joergen, Tay, Moon Y. F., Aarestrup, Frank M., Hendriksen, Rene S., Pamp, Sünje Johanna, De Cesare, Alessandra
Publicado 2020

Facing growth in the European Nucleotide Archive

por Cochrane, Guy, Alako, Blaise, Amid, Clara, Bower, Lawrence, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, Jang, Mikyung, Kay, Simon, Leinonen, Rasko, Lin, Xiu, Lopez, Rodrigo, McWilliam, Hamish, Oisel, Arnaud, Pakseresht, Nima, Pallreddy, Swapna, Park, Youngmi, Plaister, Sheila, Radhakrishnan, Rajesh, Rivière, Stephane, Rossello, Marc, Senf, Alexander, Silvester, Nicole, Smirnov, Dmitriy, ten Hoopen, Petra, Toribio, Ana, Vaughan, Daniel, Zalunin, Vadim
Publicado 2013

Assembly information services in the European Nucleotide Archive

por Pakseresht, Nima, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Gibson, Richard, Goodgame, Neil, Gur, Tamer, Jang, Mikyung, Kay, Simon, Leinonen, Rasko, Li, Weizhong, Liu, Xin, Lopez, Rodrigo, McWilliam, Hamish, Oisel, Arnaud, Pallreddy, Swapna, Plaister, Sheila, Radhakrishnan, Rajesh, Rivière, Stephane, Rossello, Marc, Senf, Alexander, Silvester, Nicole, Smirnov, Dmitriy, Squizzato, Silvano, Hoopen, Petra ten, Toribio, Ana Luisa, Vaughan, Daniel, Zalunin, Vadim, Cochrane, Guy
Publicado 2014

Identifying causative mechanisms linking early-life stress to psycho-cardio-metabolic multi-morbidity: The EarlyCause project

por Mariani, Nicole, Borsini, Alessandra, Cecil, Charlotte A. M., Felix, Janine F., Sebert, Sylvain, Cattaneo, Annamaria, Walton, Esther, Milaneschi, Yuri, Cochrane, Guy, Amid, Clara, Rajan, Jeena, Giacobbe, Juliette, Sanz, Yolanda, Agustí, Ana, Sorg, Tania, Herault, Yann, Miettunen, Jouko, Parmar, Priyanka, Cattane, Nadia, Jaddoe, Vincent, Lötjönen, Jyrki, Buisan, Carme, González Ballester, Miguel A., Piella, Gemma, Gelpi, Josep L., Lamers, Femke, Penninx, Brenda W. J. H., Tiemeier, Henning, von Tottleben, Malte, Thiel, Rainer, Heil, Katharina F., Järvelin, Marjo-Riitta, Pariante, Carmine, Mansuy, Isabelle M., Lekadir, Karim
Publicado 2021

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

por Hendriksen, Rene S., Munk, Patrick, Njage, Patrick, van Bunnik, Bram, McNally, Luke, Lukjancenko, Oksana, Röder, Timo, Nieuwenhuijse, David, Pedersen, Susanne Karlsmose, Kjeldgaard, Jette, Kaas, Rolf S., Clausen, Philip Thomas Lanken Conradsen, Vogt, Josef Korbinian, Leekitcharoenphon, Pimlapas, van de Schans, Milou G. M., Zuidema, Tina, de Roda Husman, Ana Maria, Rasmussen, Simon, Petersen, Bent, Amid, Clara, Cochrane, Guy, Sicheritz-Ponten, Thomas, Schmitt, Heike, Alvarez, Jorge Raul Matheu, Aidara-Kane, Awa, Pamp, Sünje J., Lund, Ole, Hald, Tine, Woolhouse, Mark, Koopmans, Marion P., Vigre, Håkan, Petersen, Thomas Nordahl, Aarestrup, Frank M.
Publicado 2019

The COMPARE Data Hubs

por Amid, Clara, Pakseresht, Nima, Silvester, Nicole, Jayathilaka, Suran, Lund, Ole, Dynovski, Lukasz D, Pataki, Bálint Á, Visontai, Dávid, Xavier, Basil Britto, Alako, Blaise T F, Belka, Ariane, Cisneros, Jose L B, Cotten, Matthew, Haringhuizen, George B, Harrison, Peter W, Höper, Dirk, Holt, Sam, Hundahl, Camilla, Hussein, Abdulrahman, Kaas, Rolf S, Liu, Xin, Leinonen, Rasko, Malhotra-Kumar, Surbhi, Nieuwenhuijse, David F, Rahman, Nadim, dos S Ribeiro, Carolina, Skiby, Jeffrey E, Schmitz, Dennis, Stéger, József, Szalai-Gindl, János M, Thomsen, Martin C F, Cacciò, Simone M, Csabai, István, Kroneman, Annelies, Koopmans, Marion, Aarestrup, Frank, Cochrane, Guy
Publicado 2019