Visualization of genomic data with the Hilbert curve

por Anders, Simon
Publicado 2009

Differential expression analysis for sequence count data

por Anders, Simon, Huber, Wolfgang
Publicado 2010

Exploring dimension-reduced embeddings with Sleepwalk

por Ovchinnikova, Svetlana, Anders, Simon
Publicado 2020

Focused multidimensional scaling: interactive visualization for exploration of high-dimensional data

por Urpa, Lea M., Anders, Simon
Publicado 2019

Detecting differential usage of exons from RNA-seq data

por Anders, Simon, Reyes, Alejandro, Huber, Wolfgang
Publicado 2012

HTSeq—a Python framework to work with high-throughput sequencing data

por Anders, Simon, Pyl, Paul Theodor, Huber, Wolfgang
Publicado 2015

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

por Love, Michael I, Huber, Wolfgang, Anders, Simon
Publicado 2014

RNA-Seq workflow: gene-level exploratory analysis and differential expression

por Love, Michael I., Anders, Simon, Kim, Vladislav, Huber, Wolfgang
Publicado 2015

ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

por Morgan, Martin, Anders, Simon, Lawrence, Michael, Aboyoun, Patrick, Pagès, Hervé, Gentleman, Robert
Publicado 2009

Genome-wide analysis of mRNA decay patterns during early Drosophila development

por Thomsen, Stefan, Anders, Simon, Janga, Sarath Chandra, Huber, Wolfgang, Alonso, Claudio R
Publicado 2010

Analysing high-throughput sequencing data in Python with HTSeq 2.0

por Putri, Givanna H, Anders, Simon, Pyl, Paul Theodor, Pimanda, John E, Zanini, Fabio
Publicado 2022

Single-cell polyadenylation site mapping reveals 3′ isoform choice variability

por Velten, Lars, Anders, Simon, Pekowska, Aleksandra, Järvelin, Aino I, Huber, Wolfgang, Pelechano, Vicent, Steinmetz, Lars M
Publicado 2015

FourCSeq: analysis of 4C sequencing data

por Klein, Felix A., Pakozdi, Tibor, Anders, Simon, Ghavi-Helm, Yad, Furlong, Eileen E. M., Huber, Wolfgang
Publicado 2015

Impaired response of the bronchial epithelium to inflammation characterizes severe equine asthma

por Tessier, Laurence, Côté, Olivier, Clark, Mary Ellen, Viel, Laurent, Diaz-Méndez, Andrés, Anders, Simon, Bienzle, Dorothee
Publicado 2017

Gene set enrichment analysis of the bronchial epithelium implicates contribution of cell cycle and tissue repair processes in equine asthma

por Tessier, Laurence, Côté, Olivier, Clark, Mary Ellen, Viel, Laurent, Diaz-Méndez, Andrés, Anders, Simon, Bienzle, Dorothee
Publicado 2018

An efficient method for genome-wide polyadenylation site mapping and RNA quantification

por Wilkening, Stefan, Pelechano, Vicent, Järvelin, Aino I., Tekkedil, Manu M., Anders, Simon, Benes, Vladimir, Steinmetz, Lars M.
Publicado 2013

An efficient method for genome-wide polyadenylation site mapping and RNA quantification

por Wilkening, Stefan, Pelechano, Vicent, Järvelin, Aino I., Tekkedil, Manu M., Anders, Simon, Benes, Vladimir, Steinmetz, Lars M.
Publicado 2013

Nonparametric Analysis of Thermal Proteome Profiles Reveals Novel Drug-binding Proteins

por Childs, Dorothee, Bach, Karsten, Franken, Holger, Anders, Simon, Kurzawa, Nils, Bantscheff, Marcus, Savitski, Mikhail M., Huber, Wolfgang
Publicado 2019

Sex-biased gene expression across mammalian organ development and evolution

por Rodríguez-Montes, Leticia, Ovchinnikova, Svetlana, Yuan, Xuefei, Studer, Tania, Sarropoulos, Ioannis, Anders, Simon, Kaessmann, Henrik, Cardoso-Moreira, Margarida
Publicado 2023

DEqMS: A Method for Accurate Variance Estimation in Differential Protein Expression Analysis

por Zhu, Yafeng, Orre, Lukas M., Zhou Tran, Yan, Mermelekas, Georgios, Johansson, Henrik J., Malyutina, Alina, Anders, Simon, Lehtiö, Janne
Publicado 2020