Reproducible, portable, and efficient ancient genome reconstruction with nf-core/eager

por Fellows Yates, James A., Lamnidis, Thiseas C., Borry, Maxime, Andrades Valtueña, Aida, Fagernäs, Zandra, Clayton, Stephen, Garcia, Maxime U., Neukamm, Judith, Peltzer, Alexander
Publicado 2021

A 3,000-year-old, basal S. enterica lineage from Bronze Age Xinjiang suggests spread along the Proto-Silk Road

por Wu, Xiyan, Ning, Chao, Key, Felix M., Andrades Valtueña, Aida, Lankapalli, Aditya Kumar, Gao, Shizhu, Yang, Xuan, Zhang, Fan, Liu, Linlin, Nie, Zhongzhi, Ma, Jian, Krause, Johannes, Herbig, Alexander, Cui, Yinqiu
Publicado 2021

The genetic prehistory of the Baltic Sea region

por Mittnik, Alissa, Wang, Chuan-Chao, Pfrengle, Saskia, Daubaras, Mantas, Zariņa, Gunita, Hallgren, Fredrik, Allmäe, Raili, Khartanovich, Valery, Moiseyev, Vyacheslav, Tõrv, Mari, Furtwängler, Anja, Andrades Valtueña, Aida, Feldman, Michal, Economou, Christos, Oinonen, Markku, Vasks, Andrejs, Balanovska, Elena, Reich, David, Jankauskas, Rimantas, Haak, Wolfgang, Schiffels, Stephan, Krause, Johannes
Publicado 2018

Community-curated and standardised metadata of published ancient metagenomic samples with AncientMetagenomeDir

por Fellows Yates, James A., Andrades Valtueña, Aida, Vågene, Åshild J., Cribdon, Becky, Velsko, Irina M., Borry, Maxime, Bravo-Lopez, Miriam J., Fernandez-Guerra, Antonio, Green, Eleanor J., Ramachandran, Shreya L., Heintzman, Peter D., Spyrou, Maria A., Hübner, Alexander, Gancz, Abigail S., Hider, Jessica, Allshouse, Aurora F., Zaro, Valentina, Warinner, Christina
Publicado 2021

Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes

por Spyrou, Maria A., Keller, Marcel, Tukhbatova, Rezeda I., Scheib, Christiana L., Nelson, Elizabeth A., Andrades Valtueña, Aida, Neumann, Gunnar U., Walker, Don, Alterauge, Amelie, Carty, Niamh, Cessford, Craig, Fetz, Hermann, Gourvennec, Michaël, Hartle, Robert, Henderson, Michael, von Heyking, Kristin, Inskip, Sarah A., Kacki, Sacha, Key, Felix M., Knox, Elizabeth L., Later, Christian, Maheshwari-Aplin, Prishita, Peters, Joris, Robb, John E., Schreiber, Jürgen, Kivisild, Toomas, Castex, Dominique, Lösch, Sandra, Harbeck, Michaela, Herbig, Alexander, Bos, Kirsten I., Krause, Johannes
Publicado 2019

Stone Age Yersinia pestis genomes shed light on the early evolution, diversity, and ecology of plague

por Andrades Valtueña, Aida, Neumann, Gunnar U., Spyrou, Maria A., Musralina, Lyazzat, Aron, Franziska, Beisenov, Arman, Belinskiy, Andrey B., Bos, Kirsten I., Buzhilova, Alexandra, Conrad, Matthias, Djansugurova, Leyla B., Dobeš, Miroslav, Ernée, Michal, Fernández-Eraso, Javier, Frohlich, Bruno, Furmanek, Mirosław, Hałuszko, Agata, Hansen, Svend, Harney, Éadaoin, Hiss, Alina N., Hübner, Alexander, Key, Felix M., Khussainova, Elmira, Kitov, Egor, Kitova, Alexandra O., Knipper, Corina, Kühnert, Denise, Lalueza-Fox, Carles, Littleton, Judith, Massy, Ken, Mittnik, Alissa, Mujika-Alustiza, José Antonio, Olalde, Iñigo, Papac, Luka, Penske, Sandra, Peška, Jaroslav, Pinhasi, Ron, Reich, David, Reinhold, Sabine, Stahl, Raphaela, Stäuble, Harald, Tukhbatova, Rezeda I., Vasilyev, Sergey, Veselovskaya, Elizaveta, Warinner, Christina, Stockhammer, Philipp W., Haak, Wolfgang, Krause, Johannes, Herbig, Alexander
Publicado 2022