Different microbial genera drive methane emissions in beef cattle fed with two extreme diets

por Miller, Gemma A., Auffret, Marc D., Roehe, Rainer, Nisbet, Holly, Martínez-Álvaro, Marina
Publicado 2023

MAGpy: a reproducible pipeline for the downstream analysis of metagenome-assembled genomes (MAGs)

por Stewart, Robert D, Auffret, Marc D, Snelling, Timothy J, Roehe, Rainer, Watson, Mick
Publicado 2019

Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery

por Stewart, Robert D., Auffret, Marc D., Warr, Amanda, Walker, Alan W., Roehe, Rainer, Watson, Mick
Publicado 2019

Identification of Microbial Genetic Capacities and Potential Mechanisms Within the Rumen Microbiome Explaining Differences in Beef Cattle Feed Efficiency

por Auffret, Marc D., Stewart, Robert D., Dewhurst, Richard J., Duthie, Carol-Anne, Watson, Mick, Roehe, Rainer
Publicado 2020

Bovine host genome acts on rumen microbiome function linked to methane emissions

por Martínez-Álvaro, Marina, Auffret, Marc D., Duthie, Carol-Anne, Dewhurst, Richard J., Cleveland, Matthew A., Watson, Mick, Roehe, Rainer
Publicado 2022

Fat accretion measurements strengthen the relationship between feed conversion efficiency and Nitrogen isotopic discrimination while rumen microbial genes contribute little

por Meale, Sarah J., Auffret, Marc D., Watson, Mick, Morgavi, Diego P., Cantalapiedra-Hijar, Gonzalo, Duthie, Carol-Anne, Roehe, Rainer, Dewhurst, Richard J.
Publicado 2018

Temporal stability of the rumen microbiota in beef cattle, and response to diet and supplements

por Snelling, Timothy J., Auffret, Marc D., Duthie, Carol-Anne, Stewart, Robert D., Watson, Mick, Dewhurst, Richard J., Roehe, Rainer, Walker, Alan W.
Publicado 2019

Identification of intestinal and fecal microbial biomarkers using a porcine social stress model

por Nguyen, Tuan Q., Martínez-Álvaro, Marina, Lima, Joana, Auffret, Marc D., Rutherford, Kenneth M. D., Simm, Geoff, Dewhurst, Richard J., Baima, Eric T., Roehe, Rainer
Publicado 2023

The rumen microbiome as a reservoir of antimicrobial resistance and pathogenicity genes is directly affected by diet in beef cattle

por Auffret, Marc D., Dewhurst, Richard J., Duthie, Carol-Anne, Rooke, John A., John Wallace, R., Freeman, Tom C., Stewart, Robert, Watson, Mick, Roehe, Rainer
Publicado 2017

Correction to: The rumen microbiome as a reservoir of antimicrobial resistance and pathogenicity genes is directly affected by diet in beef cattle

por Auffret, Marc D., Dewhurst, Richard J., Duthie, Carol-Anne, Rooke, John A., Wallace, R. John, Freeman, Tom C., Stewart, Robert, Watson, Mick, Roehe, Rainer
Publicado 2019

Unravelling the Role of Rumen Microbial Communities, Genes, and Activities on Milk Fatty Acid Profile Using a Combination of Omics Approaches

por Stergiadis, Sokratis, Cabeza-Luna, Irene, Mora-Ortiz, Marina, Stewart, Robert D., Dewhurst, Richard J., Humphries, David J., Watson, Mick, Roehe, Rainer, Auffret, Marc D.
Publicado 2021

Identification, Comparison, and Validation of Robust Rumen Microbial Biomarkers for Methane Emissions Using Diverse Bos Taurus Breeds and Basal Diets

por Auffret, Marc D., Stewart, Robert, Dewhurst, Richard J., Duthie, Carol-Anne, Rooke, John A., Wallace, Robert J., Freeman, Tom C., Snelling, Timothy J., Watson, Mick, Roehe, Rainer
Publicado 2018

Identification of Rumen Microbial Genes Involved in Pathways Linked to Appetite, Growth, and Feed Conversion Efficiency in Cattle

por Lima, Joana, Auffret, Marc D., Stewart, Robert D., Dewhurst, Richard J., Duthie, Carol-Anne, Snelling, Timothy J., Walker, Alan W., Freeman, Tom C., Watson, Mick, Roehe, Rainer
Publicado 2019

Identification of Complex Rumen Microbiome Interaction Within Diverse Functional Niches as Mechanisms Affecting the Variation of Methane Emissions in Bovine

por Martínez-Álvaro, Marina, Auffret, Marc D., Stewart, Robert D., Dewhurst, Richard J., Duthie, Carol-Anne, Rooke, John A., Wallace, R. John, Shih, Barbara, Freeman, Tom C., Watson, Mick, Roehe, Rainer
Publicado 2020

The Role of Microbial Community Composition in Controlling Soil Respiration Responses to Temperature

por Auffret, Marc D., Karhu, Kristiina, Khachane, Amit, Dungait, Jennifer A. J., Fraser, Fiona, Hopkins, David W., Wookey, Philip A., Singh, Brajesh K., Freitag, Thomas E., Hartley, Iain P., Prosser, James I.
Publicado 2016

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

por Stewart, Robert D., Auffret, Marc D., Warr, Amanda, Wiser, Andrew H., Press, Maximilian O., Langford, Kyle W., Liachko, Ivan, Snelling, Timothy J., Dewhurst, Richard J., Walker, Alan W., Roehe, Rainer, Watson, Mick
Publicado 2018