Glandular Segmentation of Prostate Cancer: An Illustration of How the Choice of Histopathological Stain Is One Key to Success for Computational Pathology

por Avenel, Christophe, Tolf, Anna, Dragomir, Anca, Carlbom, Ingrid B.
Publicado 2019

TissUUmaps 3: Improvements in interactive visualization, exploration, and quality assessment of large-scale spatial omics data

por Pielawski, Nicolas, Andersson, Axel, Avenel, Christophe, Behanova, Andrea, Chelebian, Eduard, Klemm, Anna, Nysjö, Fredrik, Solorzano, Leslie, Wählby, Carolina
Publicado 2023

Automated detection of vascular remodeling in tumor‐draining lymph nodes by the deep‐learning tool HEV‐finder

por Bekkhus, Tove, Avenel, Christophe, Hanna, Sabella, Franzén Boger, Mathias, Klemm, Anna, Bacovia, Daniel Vasiliu, Wärnberg, Fredrik, Wählby, Carolina, Ulvmar, Maria H
Publicado 2022

Morphological Features Extracted by AI Associated with Spatial Transcriptomics in Prostate Cancer

por Chelebian, Eduard, Avenel, Christophe, Kartasalo, Kimmo, Marklund, Maja, Tanoglidi, Anna, Mirtti, Tuomas, Colling, Richard, Erickson, Andrew, Lamb, Alastair D., Lundeberg, Joakim, Wählby, Carolina
Publicado 2021

Profiling spatiotemporal gene expression of the developing human spinal cord and implications for ependymoma origin

por Li, Xiaofei, Andrusivova, Zaneta, Czarnewski, Paulo, Langseth, Christoffer Mattsson, Andersson, Alma, Liu, Yang, Gyllborg, Daniel, Braun, Emelie, Larsson, Ludvig, Hu, Lijuan, Alekseenko, Zhanna, Lee, Hower, Avenel, Christophe, Kallner, Helena Kopp, Åkesson, Elisabet, Adameyko, Igor, Nilsson, Mats, Linnarsson, Sten, Lundeberg, Joakim, Sundström, Erik
Publicado 2023

A topographic atlas defines developmental origins of cell heterogeneity in the human embryonic lung

por Sountoulidis, Alexandros, Marco Salas, Sergio, Braun, Emelie, Avenel, Christophe, Bergenstråhle, Joseph, Theelke, Jonas, Vicari, Marco, Czarnewski, Paulo, Liontos, Andreas, Abalo, Xesus, Andrusivová, Žaneta, Mirzazadeh, Reza, Asp, Michaela, Li, Xiaofei, Hu, Lijuan, Sariyar, Sanem, Martinez Casals, Anna, Ayoglu, Burcu, Firsova, Alexandra, Michaëlsson, Jakob, Lundberg, Emma, Wählby, Carolina, Sundström, Erik, Linnarsson, Sten, Lundeberg, Joakim, Nilsson, Mats, Samakovlis, Christos
Publicado 2023