Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives

por Avershina, Ekaterina, Khezri, Abdolrahman, Ahmad, Rafi
Publicado 2023

De novo Semi-alignment of 16S rRNA Gene Sequences for Deep Phylogenetic Characterization of Next Generation Sequencing Data

por Avershina, Ekaterina, Frisli, Trine, Rudi, Knut
Publicado 2013

Plasmid Identification and Plasmid-Mediated Antimicrobial Gene Detection in Norwegian Isolates

por Khezri, Abdolrahman, Avershina, Ekaterina, Ahmad, Rafi
Publicado 2020

Fighting Antibiotic Resistance in Hospital-Acquired Infections: Current State and Emerging Technologies in Disease Prevention, Diagnostics and Therapy

por Avershina, Ekaterina, Shapovalova, Valeria, Shipulin, German
Publicado 2021

Hybrid Assembly Provides Improved Resolution of Plasmids, Antimicrobial Resistance Genes, and Virulence Factors in Escherichia coli and Klebsiella pneumoniae Clinical Isolates

por Khezri, Abdolrahman, Avershina, Ekaterina, Ahmad, Rafi
Publicado 2021

Gut Microbiota in HIV Infection: Implication for Disease Progression and Management

por Nwosu, Felix Chinweije, Avershina, Ekaterina, Wilson, Robert, Rudi, Knut
Publicado 2014

Potential association of vacuum cleaning frequency with an altered gut microbiota in pregnant women and their 2-year-old children

por Avershina, Ekaterina, Ravi, Anuradha, Storrø, Ola, Øien, Torbjørn, Johnsen, Roar, Rudi, Knut
Publicado 2015

Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing

por Taxt, Arne M., Avershina, Ekaterina, Frye, Stephan A., Naseer, Umaer, Ahmad, Rafi
Publicado 2020

Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing

por Avershina, Ekaterina, Frye, Stephan A., Ali, Jawad, Taxt, Arne M., Ahmad, Rafi
Publicado 2022

Integrons in the Intestinal Microbiota as Reservoirs for Transmission of Antibiotic Resistance Genes

por Ravi, Anuradha, Avershina, Ekaterina, Ludvigsen, Jane, L’Abée-Lund, Trine M., Rudi, Knut
Publicado 2014

Exploring the Brine Microbiota of a Traditional Norwegian Fermented Fish Product (Rakfisk) from Six Different Producers during Two Consecutive Seasonal Productions

por Bjerke, Guro Alette, Rudi, Knut, Avershina, Ekaterina, Moen, Birgitte, Blom, Hans, Axelsson, Lars
Publicado 2019

Shifts in the Midgut/Pyloric Microbiota Composition within a Honey Bee Apiary throughout a Season

por Ludvigsen, Jane, Rangberg, Anbjørg, Avershina, Ekaterina, Sekelja, Monika, Kreibich, Claus, Amdam, Gro, Rudi, Knut
Publicado 2015

Diet-Dependent Modular Dynamic Interactions of the Equine Cecal Microbiota

por Kristoffersen, Camilla, Jensen, Rasmus B., Avershina, Ekaterina, Austbø, Dag, Tauson, Anne-Helene, Rudi, Knut
Publicado 2016

Early gut mycobiota and mother-offspring transfer

por Schei, Kasper, Avershina, Ekaterina, Øien, Torbjørn, Rudi, Knut, Follestad, Turid, Salamati, Saideh, Ødegård, Rønnaug Astri
Publicado 2017

Diversity of vaginal microbiota increases by the time of labor onset

por Avershina, Ekaterina, Slangsvold, Silje, Simpson, Melanie Rae, Storrø, Ola, Johnsen, Roar, Øien, Torbjørn, Rudi, Knut
Publicado 2017

Low Maternal Microbiota Sharing across Gut, Breast Milk and Vagina, as Revealed by 16S rRNA Gene and Reduced Metagenomic Sequencing

por Avershina, Ekaterina, Angell, Inga Leena, Simpson, Melanie, Storrø, Ola, Øien, Torbjørn, Johnsen, Roar, Rudi, Knut
Publicado 2018

Correction to: Early gut mycobiota and mother-offspring transfer

por Schei, Kasper, Avershina, Ekaterina, Øien, Torbjørn, Rudi, Knut, Follestad, Turid, Salamati, Saideh, Ødegård, Rønnaug Astri
Publicado 2021

Culture dependent and independent analyses suggest a low level of sharing of endospore-forming species between mothers and their children

por Avershina, Ekaterina, Larsen, Marte Gro, Aspholm, Marina, Lindback, Toril, Storrø, Ola, Øien, Torbjørn, Johnsen, Roar, Rudi, Knut
Publicado 2020

Age-Dependent Fecal Bacterial Correlation to Inflammatory Bowel Disease for Newly Diagnosed Untreated Children

por Nwosu, Felix Chinweije, Thorkildsen, Lill-Therse, Avershina, Ekaterina, Ricanek, Petr, Perminow, Gøri, Brackmann, Stephan, Vatn, Morten H., Rudi, Knut
Publicado 2013

Dominant Fecal Microbiota in Newly Diagnosed Untreated Inflammatory Bowel Disease Patients

por Thorkildsen, Lill Therese, Nwosu, Felix Chinweije, Avershina, Ekaterina, Ricanek, Petr, Perminow, Gøri, Brackmann, Stephan, Vatn, Morten H., Rudi, Knut
Publicado 2013