GeneDB and Wikidata

por Manske, Magnus, Böhme, Ulrike, Püthe, Christoph, Berriman, Matt
Publicado 2019

BamView: viewing mapped read alignment data in the context of the reference sequence

por Carver, Tim, Böhme, Ulrike, Otto, Thomas D., Parkhill, Julian, Berriman, Matthew
Publicado 2010

Progression of the canonical reference malaria parasite genome from 2002–2019

por Böhme, Ulrike, Otto, Thomas D., Sanders, Mandy, Newbold, Chris I., Berriman, Matthew
Publicado 2019

The Systematic Functional Analysis of Plasmodium Protein Kinases Identifies Essential Regulators of Mosquito Transmission

por Tewari, Rita, Straschil, Ursula, Bateman, Alex, Böhme, Ulrike, Cherevach, Inna, Gong, Peng, Pain, Arnab, Billker, Oliver
Publicado 2010

Meeting report: a workshop on Best Practices in Genome Annotation

por Madupu, Ramana, Brinkac, Lauren M., Harrow, Jennifer, Wilming, Laurens G., Böhme, Ulrike, Lamesch, Philippe, Hannick, Linda I.
Publicado 2010

Evolutionary analysis of the most polymorphic gene family in falciparum malaria

por Otto, Thomas D., Assefa, Sammy A., Böhme, Ulrike, Sanders, Mandy J., Kwiatkowski, Dominic, Berriman, Matt, Newbold, Chris
Publicado 2019

Artemis and ACT: viewing, annotating and comparing sequences stored in a relational database

por Carver, Tim, Berriman, Matthew, Tivey, Adrian, Patel, Chinmay, Böhme, Ulrike, Barrell, Barclay G., Parkhill, Julian, Rajandream, Marie-Adèle
Publicado 2008

Genomic and transcriptomic comparisons of closely related malaria parasites differing in virulence and sequestration pattern

por Lin, Jing-wen, Reid, Adam J., Cunningham, Deirdre, Böhme, Ulrike, Tumwine, Irene, Keller-Mclaughlin, Sara, Sanders, Mandy, Berriman, Matthew, Langhorne, Jean
Publicado 2018

Analysis of Plasmodium vivax schizont transcriptomes from field isolates reveals heterogeneity of expression of genes involved in host-parasite interactions

por Siegel, Sasha V., Chappell, Lia, Hostetler, Jessica B., Amaratunga, Chanaki, Suon, Seila, Böhme, Ulrike, Berriman, Matthew, Fairhurst, Rick M., Rayner, Julian C.
Publicado 2020

An improved Plasmodium cynomolgi genome assembly reveals an unexpected methyltransferase gene expansion

por Pasini, Erica M, Böhme, Ulrike, Rutledge, Gavin G., Voorberg-Van der Wel, Annemarie, Sanders, Mandy, Berriman, Matt, Kocken, Clemens HM, Otto, Thomas Dan
Publicado 2017

Genomic and transcriptomic evidence for descent from Plasmodium and loss of blood schizogony in Hepatocystis parasites from naturally infected red colobus monkeys

por Aunin, Eerik, Böhme, Ulrike, Sanderson, Theo, Simons, Noah D., Goldberg, Tony L., Ting, Nelson, Chapman, Colin A., Newbold, Chris I., Berriman, Matthew, Reid, Adam J.
Publicado 2020

New insights into the blood-stage transcriptome of Plasmodium falciparum using RNA-Seq

por Otto, Thomas D, Wilinski, Daniel, Assefa, Sammy, Keane, Thomas M, Sarry, Louis R, Böhme, Ulrike, Lemieux, Jacob, Barrell, Bart, Pain, Arnab, Berriman, Matthew, Newbold, Chris, Llinás, Manuel
Publicado 2010

Characterization and gene expression analysis of the cir multi-gene family of plasmodium chabaudi chabaudi (AS)

por Lawton, Jennifer, Brugat, Thibaut, Yan, Yam Xue, Reid, Adam James, Böhme, Ulrike, Otto, Thomas Dan, Pain, Arnab, Jackson, Andrew, Berriman, Matthew, Cunningham, Deirdre, Preiser, Peter, Langhorne, Jean
Publicado 2012

A new Plasmodium vivax reference sequence with improved assembly of the subtelomeres reveals an abundance of pir genes

por Auburn, Sarah, Böhme, Ulrike, Steinbiss, Sascha, Trimarsanto, Hidayat, Hostetler, Jessica, Sanders, Mandy, Gao, Qi, Nosten, Francois, Newbold, Chris I., Berriman, Matthew, Price, Ric N., Otto, Thomas D.
Publicado 2016

TriTrypDB: An integrated functional genomics resource for kinetoplastida

por Shanmugasundram, Achchuthan, Starns, David, Böhme, Ulrike, Amos, Beatrice, Wilkinson, Paul A., Harb, Omar S., Warrenfeltz, Susanne, Kissinger, Jessica C., McDowell, Mary Ann, Roos, David S., Crouch, Kathryn, Jones, Andrew R.
Publicado 2023

Genome sequencing of chimpanzee malaria parasites reveals possible pathways of adaptation to human hosts

por Otto, Thomas D., Rayner, Julian C., Böhme, Ulrike, Pain, Arnab, Spottiswoode, Natasha, Sanders, Mandy, Quail, Michael, Ollomo, Benjamin, Renaud, François, Thomas, Alan W., Prugnolle, Franck, Conway, David J., Newbold, Chris, Berriman, Matthew
Publicado 2014

The complete genome sequence of Eimeria tenella (Tyzzer 1929), a common gut parasite of chickens

por Aunin, Eerik, Böhme, Ulrike, Blake, Damer, Dove, Alexander, Smith, Michelle, Corton, Craig, Oliver, Karen, Betteridge, Emma, Quail, Michael A., McCarthy, Shane A., Wood, Jonathan, Tracey, Alan, Torrance, James, Sims, Ying, Howe, Kerstin, Challis, Richard, Berriman, Matthew, Reid, Adam
Publicado 2021

Complete avian malaria parasite genomes reveal features associated with lineage-specific evolution in birds and mammals

por Böhme, Ulrike, Otto, Thomas D., Cotton, James A., Steinbiss, Sascha, Sanders, Mandy, Oyola, Samuel O., Nicot, Antoine, Gandon, Sylvain, Patra, Kailash P., Herd, Colin, Bushell, Ellen, Modrzynska, Katarzyna K., Billker, Oliver, Vinetz, Joseph M., Rivero, Ana, Newbold, Chris I., Berriman, Matthew
Publicado 2018

Genomes of all known members of a Plasmodium subgenus reveal paths to virulent human malaria

por Otto, Thomas D., Gilabert, Aude, Crellen, Thomas, Böhme, Ulrike, Arnathau, Céline, Sanders, Mandy, Oyola, Samuel O., Okouga, Alain Prince, Boundenga, Larson, Willaume, Eric, Ngoubangoye, Barthélémy, Moukodoum, Nancy Diamella, Paupy, Christophe, Durand, Patrick, Rougeron, Virginie, Ollomo, Benjamin, Renaud, François, Newbold, Chris, Berriman, Matthew, Prugnolle, Franck
Publicado 2018

A comprehensive evaluation of rodent malaria parasite genomes and gene expression

por Otto, Thomas D, Böhme, Ulrike, Jackson, Andrew P, Hunt, Martin, Franke-Fayard, Blandine, Hoeijmakers, Wieteke A M, Religa, Agnieszka A, Robertson, Lauren, Sanders, Mandy, Ogun, Solabomi A, Cunningham, Deirdre, Erhart, Annette, Billker, Oliver, Khan, Shahid M, Stunnenberg, Hendrik G, Langhorne, Jean, Holder, Anthony A, Waters, Andrew P, Newbold, Chris I, Pain, Arnab, Berriman, Matthew, Janse, Chris J
Publicado 2014