Pooling across cells to normalize single-cell RNA sequencing data with many zero counts

por L. Lun, Aaron T., Bach, Karsten, Marioni, John C.
Publicado 2016

Detection and removal of barcode swapping in single-cell RNA-seq data

por Griffiths, Jonathan A., Richard, Arianne C., Bach, Karsten, Lun, Aaron T. L., Marioni, John C.
Publicado 2018

Cannabinoid 1 receptor signaling on GABAergic neurons influences astrocytes in the ageing brain

por Bilkei-Gorzo, Andras, Albayram, Onder, Ativie, Frank, Chasan, Safak, Zimmer, Till, Bach, Karsten, Zimmer, Andreas
Publicado 2018

European Network of Breast Development and Cancer turned 10 years: a growing family of mammary gland researchers

por Koledova, Zuzana, Howard, Beatrice A., Englund, Johanna, Bach, Karsten, Bentires-Alj, Mohammed, Gonzalez-Suarez, Eva
Publicado 2018

Fragment-sequencing unveils local tissue microenvironments at single-cell resolution

por Handler, Kristina, Bach, Karsten, Borrelli, Costanza, Piscuoglio, Salvatore, Ficht, Xenia, Acar, Ilhan E., Moor, Andreas E.
Publicado 2023

Differentiation dynamics of mammary epithelial cells revealed by single-cell RNA sequencing

por Bach, Karsten, Pensa, Sara, Grzelak, Marta, Hadfield, James, Adams, David J., Marioni, John C., Khaled, Walid T.
Publicado 2017

Nonparametric Analysis of Thermal Proteome Profiles Reveals Novel Drug-binding Proteins

por Childs, Dorothee, Bach, Karsten, Franken, Holger, Anders, Simon, Kurzawa, Nils, Bantscheff, Marcus, Savitski, Mikhail M., Huber, Wolfgang
Publicado 2019

Transcriptional changes in the mammary gland during lactation revealed by single cell sequencing of cells from human milk

por Twigger, Alecia-Jane, Engelbrecht, Lisa K., Bach, Karsten, Schultz-Pernice, Isabel, Pensa, Sara, Stenning, Jack, Petricca, Stefania, Scheel, Christina H., Khaled, Walid T.
Publicado 2022

Single-cell RNAseq reveals seven classes of colonic sensory neuron

por Hockley, James R F, Taylor, Toni S, Callejo, Gerard, Wilbrey, Anna L, Gutteridge, Alex, Bach, Karsten, Winchester, Wendy J, Bulmer, David C, McMurray, Gordon, Smith, Ewan St John
Publicado 2019

Time-resolved single-cell analysis of Brca1 associated mammary tumourigenesis reveals aberrant differentiation of luminal progenitors

por Bach, Karsten, Pensa, Sara, Zarocsinceva, Marija, Kania, Katarzyna, Stockis, Julie, Pinaud, Silvain, Lazarus, Kyren A., Shehata, Mona, Simões, Bruno M., Greenhalgh, Alice R., Howell, Sacha J., Clarke, Robert B., Caldas, Carlos, Halim, Timotheus Y. F., Marioni, John C., Khaled, Walid T.
Publicado 2021

BCL11A interacts with SOX2 to control the expression of epigenetic regulators in lung squamous carcinoma

por Lazarus, Kyren A., Hadi, Fazal, Zambon, Elisabetta, Bach, Karsten, Santolla, Maria-Francesca, Watson, Julie K., Correia, Lucia L., Das, Madhumita, Ugur, Rosemary, Pensa, Sara, Becker, Lukas, Campos, Lia S., Ladds, Graham, Liu, Pentao, Evan, Gerard I., McCaughan, Frank M., Le Quesne, John, Lee, Joo-Hyeon, Calado, Dinis, Khaled, Walid T.
Publicado 2018

Active eosinophils regulate host defence and immune responses in colitis

por Gurtner, Alessandra, Borrelli, Costanza, Gonzalez-Perez, Ignacio, Bach, Karsten, Acar, Ilhan E., Núñez, Nicolás G., Crepaz, Daniel, Handler, Kristina, Vu, Vivian P., Lafzi, Atefeh, Stirm, Kristin, Raju, Deeksha, Gschwend, Julia, Basler, Konrad, Schneider, Christoph, Slack, Emma, Valenta, Tomas, Becher, Burkhard, Krebs, Philippe, Moor, Andreas E., Arnold, Isabelle C.
Publicado 2022

Coagulation factor V is a T-cell inhibitor expressed by leukocytes in COVID-19

por Wang, Jun, Kotagiri, Prasanti, Lyons, Paul A., Al-Lamki, Rafia S., Mescia, Federica, Bergamaschi, Laura, Turner, Lorinda, Morgan, Michael D., Calero-Nieto, Fernando J., Bach, Karsten, Mende, Nicole, Wilson, Nicola K., Watts, Emily R., Maxwell, Patrick H., Chinnery, Patrick F., Kingston, Nathalie, Papadia, Sofia, Stirrups, Kathleen E., Walker, Neil, Gupta, Ravindra K., Menon, David K., Allinson, Kieren, Aitken, Sarah J., Toshner, Mark, Weekes, Michael P., Nathan, James A., Walmsley, Sarah R., Ouwehand, Willem H., Kasanicki, Mary, Göttgens, Berthold, Marioni, John C., Smith, Kenneth G.C., Pober, Jordan S., Bradley, John R.
Publicado 2022

Single-cell multi-omics analysis of the immune response in COVID-19

por Stephenson, Emily, Reynolds, Gary, Botting, Rachel A., Calero-Nieto, Fernando J., Morgan, Michael D., Tuong, Zewen Kelvin, Bach, Karsten, Sungnak, Waradon, Worlock, Kaylee B., Yoshida, Masahiro, Kumasaka, Natsuhiko, Kania, Katarzyna, Engelbert, Justin, Olabi, Bayanne, Spegarova, Jarmila Stremenova, Wilson, Nicola K., Mende, Nicole, Jardine, Laura, Gardner, Louis C. S., Goh, Issac, Horsfall, Dave, McGrath, Jim, Webb, Simone, Mather, Michael W., Lindeboom, Rik G. H., Dann, Emma, Huang, Ni, Polanski, Krzysztof, Prigmore, Elena, Gothe, Florian, Scott, Jonathan, Payne, Rebecca P., Baker, Kenneth F., Hanrath, Aidan T., Schim van der Loeff, Ina C. D., Barr, Andrew S., Sanchez-Gonzalez, Amada, Bergamaschi, Laura, Mescia, Federica, Barnes, Josephine L., Kilich, Eliz, de Wilton, Angus, Saigal, Anita, Saleh, Aarash, Janes, Sam M., Smith, Claire M., Gopee, Nusayhah, Wilson, Caroline, Coupland, Paul, Coxhead, Jonathan M., Kiselev, Vladimir Yu, van Dongen, Stijn, Bacardit, Jaume, King, Hamish W., Rostron, Anthony J., Simpson, A. John, Hambleton, Sophie, Laurenti, Elisa, Lyons, Paul A., Meyer, Kerstin B., Nikolić, Marko Z., Duncan, Christopher J. A., Smith, Kenneth G. C., Teichmann, Sarah A., Clatworthy, Menna R., Marioni, John C., Göttgens, Berthold, Haniffa, Muzlifah
Publicado 2021