Computational reconstruction of atomistic protein structures from coarse-grained models

por Badaczewska-Dawid, Aleksandra E., Kolinski, Andrzej, Kmiecik, Sebastian
Publicado 2019

Docking of peptides to GPCRs using a combination of CABS-dock with FlexPepDock refinement

por Badaczewska-Dawid, Aleksandra E, Kmiecik, Sebastian, Koliński, Michał
Publicado 2020

BIAPSS: A Comprehensive Physicochemical Analyzer of Proteins Undergoing Liquid–Liquid Phase Separation

por Badaczewska-Dawid, Aleksandra E., Uversky, Vladimir N., Potoyan, Davit A.
Publicado 2022

Modeling of Protein Structural Flexibility and Large-Scale Dynamics: Coarse-Grained Simulations and Elastic Network Models

por Kmiecik, Sebastian, Kouza, Maksim, Badaczewska-Dawid, Aleksandra E., Kloczkowski, Andrzej, Kolinski, Andrzej
Publicado 2018

MAPIYA contact map server for identification and visualization of molecular interactions in proteins and biological complexes

por Badaczewska-Dawid, Aleksandra E, Nithin, Chandran, Wroblewski, Karol, Kurcinski, Mateusz, Kmiecik, Sebastian
Publicado 2022

BioShell 3.0: Library for Processing Structural Biology Data

por Macnar, Joanna M., Szulc, Natalia A., Kryś, Justyna D., Badaczewska-Dawid, Aleksandra E., Gront, Dominik
Publicado 2020

A3D database: structure-based predictions of protein aggregation for the human proteome

por Badaczewska-Dawid, Aleksandra E, Garcia-Pardo, Javier, Kuriata, Aleksander, Pujols, Jordi, Ventura, Salvador, Kmiecik, Sebastian
Publicado 2022

CABS-dock standalone: a toolbox for flexible protein–peptide docking

por Kurcinski, Mateusz, Pawel Ciemny, Maciej, Oleniecki, Tymoteusz, Kuriata, Aleksander, Badaczewska-Dawid, Aleksandra E, Kolinski, Andrzej, Kmiecik, Sebastian
Publicado 2019

HaDeX: an R package and web-server for analysis of data from hydrogen–deuterium exchange mass spectrometry experiments

por Puchała, Weronika, Burdukiewicz, Michał, Kistowski, Michał, Dąbrowska, Katarzyna A, Badaczewska-Dawid, Aleksandra E, Cysewski, Dominik, Dadlez, Michał
Publicado 2020

A3DyDB: exploring structural aggregation propensities in the yeast proteome

por Garcia-Pardo, Javier, Badaczewska-Dawid, Aleksandra E., Pintado-Grima, Carlos, Iglesias, Valentín, Kuriata, Aleksander, Kmiecik, Sebastian, Ventura, Salvador
Publicado 2023