Illuminating the oral microbiome and its host interactions: recent advancements in omics and bioinformatics technologies in the context of oral microbiome research

por Baker, Jonathon L
Publicado 2023

Complete Genome Sequence of Strain JB001, a Member of Saccharibacteria Clade G6 (“Candidatus Nanogingivalaceae”)

por Baker, Jonathon L.
Publicado 2021

Complete Genomes of Clade G6 Saccharibacteria Suggest a Divergent Ecological Niche and Lifestyle

por Baker, Jonathon L.
Publicado 2021

Complete Genome Sequence of “Candidatus Nanosynbacter” Strain HMT-348_TM7c-JB, a Member of Saccharibacteria Clade G1

por Baker, Jonathon L.
Publicado 2022

Using Nanopore Sequencing to Obtain Complete Bacterial Genomes from Saliva Samples

por Baker, Jonathon L.
Publicado 2022

Exploiting the Oral Microbiome to Prevent Tooth Decay: Has Evolution Already Provided the Best Tools?

por Baker, Jonathon L., Edlund, Anna
Publicado 2019

Composite Long- and Short-Read Sequencing Delivers a Complete Genome Sequence of B04Sm5, a Reutericyclin- and Mutanocyclin-Producing Strain of Streptococcus mutans

por Baker, Jonathon L., Edlund, Anna
Publicado 2020

Tetramic Acids Mutanocyclin and Reutericyclin A, Produced by Streptococcus mutans Strain B04Sm5 Modulate the Ecology of an in vitro Oral Biofilm

por Uranga, Carla, Nelson, Karen E., Edlund, Anna, Baker, Jonathon L.
Publicado 2022

mucG, mucH, and mucI Modulate Production of Mutanocyclin and Reutericyclins in Streptococcus mutans B04Sm5

por Baker, Jonathon L., Tang, Xiaoyu, LaBonte, Sandra, Uranga, Carla, Edlund, Anna
Publicado 2022

Analysis of the Streptococcus mutans Proteome during Acid and Oxidative Stress Reveals Modules of Protein Coexpression and an Expanded Role for the TreR Transcriptional Regulator

por Tinder, Elizabeth L., Faustoferri, Roberta C., Buckley, Andrew A., Quivey, Robert G., Baker, Jonathon L.
Publicado 2022

Deep metagenomics examines the oral microbiome during dental caries, revealing novel taxa and co-occurrences with host molecules

por Baker, Jonathon L., Morton, James T., Dinis, Márcia, Alvarez, Ruth, Tran, Nini C., Knight, Rob, Edlund, Anna
Publicado 2021

Multi-Omics Study of Keystone Species in a Cystic Fibrosis Microbiome

por Silveira, Cynthia B., Cobián-Güemes, Ana G., Uranga, Carla, Baker, Jonathon L., Edlund, Anna, Rohwer, Forest, Conrad, Douglas
Publicado 2021

Klebsiella and Providencia emerge as lone survivors following long-term starvation of oral microbiota

por Baker, Jonathon L., Hendrickson, Erik L., Tang, Xiaoyu, Lux, Renate, He, Xuesong, Edlund, Anna, McLean, Jeffrey S., Shi, Wenyuan
Publicado 2019

Development of a Bacteriophage Cocktail to Constrain the Emergence of Phage-Resistant Pseudomonas aeruginosa

por Yang, Yuhui, Shen, Wei, Zhong, Qiu, Chen, Qian, He, Xuesong, Baker, Jonathon L., Xiong, Kun, Jin, Xiaoling, Wang, Jing, Hu, Fuquan, Le, Shuai
Publicado 2020

Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

por Aleti, Gajender, Baker, Jonathon L., Tang, Xiaoyu, Alvarez, Ruth, Dinis, Márcia, Tran, Nini C., Melnik, Alexey V., Zhong, Cuncong, Ernst, Madeleine, Dorrestein, Pieter C., Edlund, Anna
Publicado 2019

Cariogenic Streptococcus mutans Produces Tetramic Acid Strain-Specific Antibiotics That Impair Commensal Colonization

por Tang, Xiaoyu, Kudo, Yuta, Baker, Jonathon L., LaBonte, Sandra, Jordan, Peter A., McKinnie, Shaun M. K., Guo, Jian, Huan, Tao, Moore, Bradley S., Edlund, Anna
Publicado 2020

Host Factor SAMHD1 Restricts DNA Viruses in Non-Dividing Myeloid Cells

por Hollenbaugh, Joseph A., Gee, Peter, Baker, Jonathon, Daly, Michele B., Amie, Sarah M., Tate, Jessica, Kasai, Natsumi, Kanemura, Yuka, Kim, Dong-Hyun, Ward, Brian M., Koyanagi, Yoshio, Kim, Baek
Publicado 2013