Challenges of analysing stochastic gene expression in bacteria using single-cell time-lapse experiments

por Hardo, Georgeos, Bakshi, Somenath
Publicado 2021

The context matrix: Navigating biological complexity for advanced biodesign

por Moschner, Camillo, Wedd , Charlie, Bakshi , Somenath
Publicado 2022

Synthetic Micrographs of Bacteria (SyMBac) allows accurate segmentation of bacterial cells using deep neural networks

por Hardo, Georgeos, Noka, Maximilian, Bakshi, Somenath
Publicado 2022

The spatial biology of transcription and translation in rapidly growing Escherichia coli

por Bakshi, Somenath, Choi, Heejun, Weisshaar, James C.
Publicado 2015

Editorial: Next-generation quantitative and synthetic biology: High-sensitivity, high-accuracy, and digital approaches

por Okumus, Burak, Pedraza, Juan M., Bakshi, Somenath
Publicado 2023

Bacterial persisters are a stochastically formed subpopulation of low-energy cells

por Manuse, Sylvie, Shan, Yue, Canas-Duarte, Silvia J., Bakshi, Somenath, Sun, Wei-Sheng, Mori, Hirotada, Paulsson, Johan, Lewis, Kim
Publicado 2021

Quantification of very low-abundant proteins in bacteria using the HaloTag and epi-fluorescence microscopy

por Lepore, Alessia, Taylor, Hannah, Landgraf, Dirk, Okumus, Burak, Jaramillo-Riveri, Sebastián, McLaren, Lorna, Bakshi, Somenath, Paulsson, Johan, Karoui, M. El
Publicado 2019

Bacterial variability in the mammalian gut captured by a single-cell synthetic oscillator

por Riglar, David T., Richmond, David L., Potvin-Trottier, Laurent, Verdegaal, Andrew A., Naydich, Alexander D., Bakshi, Somenath, Leoncini, Emanuele, Lyon, Lorena G., Paulsson, Johan, Silver, Pamela A.
Publicado 2019

Author Correction: Bacterial variability in the mammalian gut captured by a single-cell synthetic oscillator

por Riglar, David T., Richmond, David L., Potvin-Trottier, Laurent, Verdegaal, Andrew A., Naydich, Alexander D., Bakshi, Somenath, Leoncini, Emanuele, Lyon, Lorena G., Paulsson, Johan, Silver, Pamela A.
Publicado 2021

Corrigendum: Mechanical slowing-down of cytoplasmic diffusion allows in vivo counting of proteins in individual cells

por Okumus, Burak, Landgraf, Dirk, Lai, Ghee Chuan, Bakshi, Somenath, Arias-Castro, Juan Carlos, Yildiz, Sadik, Huh, Dann, Fernandez-Lopez, Raul, Peterson, Celeste N., Toprak, Erdal, El Karoui, Meriem, Paulsson, Johan
Publicado 2016