Developing image analysis methods for digital pathology

por Bankhead, Peter
Publicado 2022

The ventral habenulae of zebrafish develop in prosomere 2 dependent on Tcf7l2 function

por Beretta, Carlo A, Dross, Nicolas, Bankhead, Peter, Carl, Matthias
Publicado 2013

Translation suppression promotes stress granule formation and cell survival in response to cold shock

por Hofmann, Sarah, Cherkasova, Valeria, Bankhead, Peter, Bukau, Bernd, Stoecklin, Georg
Publicado 2012

Digital pathology: 15th European congress, ECDP 2019, Warwick, UK, april 10-13, 2019, proceedings

por Reyes-Aldasoro, Constantino Carlos, Janowczyk, Andrew, Veta, Mitko, Bankhead, Peter, Sirinukunwattana, Korsuk
Publicado 2019

QuPath Algorithm Accurately Identifies MLH1-Deficient Inflammatory Bowel Disease-Associated Colorectal Cancers in a Tissue Microarray

por Porter, Ross J., Din, Shahida, Bankhead, Peter, Oniscu, Anca, Arends, Mark J.
Publicado 2023

Fast Retinal Vessel Detection and Measurement Using Wavelets and Edge Location Refinement

por Bankhead, Peter, Scholfield, C. Norman, McGeown, J. Graham, Curtis, Tim M.
Publicado 2012

Xenopus cytoplasmic linker–associated protein 1 (XCLASP1) promotes axon elongation and advance of pioneer microtubules

por Marx, Astrid, Godinez, William J., Tsimashchuk, Vasil, Bankhead, Peter, Rohr, Karl, Engel, Ulrike
Publicado 2013

Automated Detection and Measurement of Isolated Retinal Arterioles by a Combination of Edge Enhancement and Cost Analysis

por Fernández, José A., Bankhead, Peter, Zhou, Huiyu, McGeown, J. Graham, Curtis, Tim M.
Publicado 2014

Developing open-source software for bioimage analysis: opportunities and challenges

por Levet, Florian, Carpenter, Anne E., Eliceiri, Kevin W., Kreshuk, Anna, Bankhead, Peter, Haase, Robert
Publicado 2021

AimSeg: A machine-learning-aided tool for axon, inner tongue and myelin segmentation

por Carrillo-Barberà, Pau, Rondelli, Ana Maria, Morante-Redolat, Jose Manuel, Vernay, Bertrand, Williams, Anna, Bankhead, Peter
Publicado 2023

Using the R Package Spatstat to Assess Inhibitory Effects of Microregional Hypoxia on the Infiltration of Cancers of the Head and Neck Region by Cytotoxic T Lymphocytes

por Kaufmann, Justus, Biscio, Christophe A. N., Bankhead, Peter, Zimmer, Stefanie, Schmidberger, Heinz, Rubak, Ege, Mayer, Arnulf
Publicado 2021

cudaMap: a GPU accelerated program for gene expression connectivity mapping

por McArt, Darragh G, Bankhead, Peter, Dunne, Philip D, Salto-Tellez, Manuel, Hamilton, Peter, Zhang, Shu-Dong
Publicado 2013

Human Pancreatic Carcinoma-Associated Fibroblasts Promote Expression of Co-inhibitory Markers on CD4(+) and CD8(+) T-Cells

por Gorchs, Laia, Fernández Moro, Carlos, Bankhead, Peter, Kern, Katharina P., Sadeak, Imrul, Meng, Qingda, Rangelova, Elena, Kaipe, Helen
Publicado 2019

Characterization of a murine mixed neuron-glia model and cellular responses to regulatory T cell-derived factors

por Dittmer, Marie, Young, Andrew, O’Hagan, Thomas, Eleftheriadis, George, Bankhead, Peter, Dombrowski, Yvonne, Medina, Reinhold J., Fitzgerald, Denise C.
Publicado 2018

Embracing an integromic approach to tissue biomarker research in cancer: Perspectives and lessons learned

por Li, Gerald, Bankhead, Peter, Dunne, Philip D, O’Reilly, Paul G, James, Jacqueline A, Salto-Tellez, Manuel, Hamilton, Peter W, McArt, Darragh G
Publicado 2017

The RNA processing factors THRAP3 and BCLAF1 promote the DNA damage response through selective mRNA splicing and nuclear export

por Vohhodina, Jekaterina, Barros, Eliana M., Savage, Abigail L., Liberante, Fabio G., Manti, Lorenzo, Bankhead, Peter, Cosgrove, Nicola, Madden, Angelina F., Harkin, D. Paul, Savage, Kienan I.
Publicado 2017

QUADrATiC: scalable gene expression connectivity mapping for repurposing FDA-approved therapeutics

por O’Reilly, Paul G., Wen, Qing, Bankhead, Peter, Dunne, Philip D., McArt, Darragh G., McPherson, Suzanne, Hamilton, Peter W., Mills, Ken I., Zhang, Shu-Dong
Publicado 2016

QuPath: Open source software for digital pathology image analysis

por Bankhead, Peter, Loughrey, Maurice B., Fernández, José A., Dombrowski, Yvonne, McArt, Darragh G., Dunne, Philip D., McQuaid, Stephen, Gray, Ronan T., Murray, Liam J., Coleman, Helen G., James, Jacqueline A., Salto-Tellez, Manuel, Hamilton, Peter W.
Publicado 2017

A biologist’s guide to planning and performing quantitative bioimaging experiments

por Senft, Rebecca A., Diaz-Rohrer, Barbara, Colarusso, Pina, Swift, Lucy, Jamali, Nasim, Jambor, Helena, Pengo, Thomas, Brideau, Craig, Llopis, Paula Montero, Uhlmann, Virginie, Kirk, Jason, Gonzales, Kevin Andrew, Bankhead, Peter, Evans, Edward L., Eliceiri, Kevin W., Cimini, Beth A.
Publicado 2023

Automated tumor analysis for molecular profiling in lung cancer

por Hamilton, Peter W., Wang, Yinhai, Boyd, Clinton, James, Jacqueline A., Loughrey, Maurice B., Hougton, Joseph P., Boyle, David P., Kelly, Paul, Maxwell, Perry, McCleary, David, Diamond, James, McArt, Darragh G., Tunstall, Jonathon, Bankhead, Peter, Salto-Tellez, Manuel
Publicado 2015