A curated, ontology-based, large-scale knowledge graph of artificial intelligence tasks and benchmarks

por Blagec, Kathrin, Barbosa-Silva, Adriano, Ott, Simon, Samwald, Matthias
Publicado 2022

Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence

por Barbosa-Silva, Adriano, Satagopam, Venkata P, Schneider, Reinhard, Ortega, J Miguel
Publicado 2008

A reference guide for tree analysis and visualization

por Pavlopoulos, Georgios A, Soldatos, Theodoros G, Barbosa-Silva, Adriano, Schneider, Reinhard
Publicado 2010

uORFdb—a comprehensive literature database on eukaryotic uORF biology

por Wethmar, Klaus, Barbosa-Silva, Adriano, Andrade-Navarro, Miguel A., Leutz, Achim
Publicado 2014

Mapping global dynamics of benchmark creation and saturation in artificial intelligence

por Ott, Simon, Barbosa-Silva, Adriano, Blagec, Kathrin, Brauner, Jan, Samwald, Matthias
Publicado 2022

Génie: literature-based gene prioritization at multi genomic scale

por Fontaine, Jean-Fred, Priller, Florian, Barbosa-Silva, Adriano, Andrade-Navarro, Miguel A.
Publicado 2011

SmartR: an open-source platform for interactive visual analytics for translational research data

por Herzinger, Sascha, Gu, Wei, Satagopam, Venkata, Eifes, Serge, Rege, Kavita, Barbosa-Silva, Adriano, Schneider, Reinhard
Publicado 2017

MedlineRanker: flexible ranking of biomedical literature

por Fontaine, Jean-Fred, Barbosa-Silva, Adriano, Schaefer, Martin, Huska, Matthew R., Muro, Enrique M., Andrade-Navarro, Miguel A.
Publicado 2009

PESCADOR, a web-based tool to assist text-mining of biointeractions extracted from PubMed queries

por Barbosa-Silva, Adriano, Fontaine, Jean-Fred, Donnard, Elisa R, Stussi, Fernanda, Ortega, J Miguel, Andrade-Navarro, Miguel A
Publicado 2011

Integration and Visualization of Translational Medicine Data for Better Understanding of Human Diseases

por Satagopam, Venkata, Gu, Wei, Eifes, Serge, Gawron, Piotr, Ostaszewski, Marek, Gebel, Stephan, Barbosa-Silva, Adriano, Balling, Rudi, Schneider, Reinhard
Publicado 2016

LAITOR4HPC: A text mining pipeline based on HPC for building interaction networks

por Piereck, Bruna, Oliveira-Lima, Marx, Benko-Iseppon, Ana Maria, Diehl, Sarah, Schneider, Reinhard, Brasileiro-Vidal, Ana Christina, Barbosa-Silva, Adriano
Publicado 2020

A Data Science Approach for the Identification of Molecular Signatures of Aggressive Cancers

por Barbosa-Silva, Adriano, Magalhães, Milena, da Silva, Gilberto Ferreira, da Silva, Fabricio Alves Barbosa, Carneiro, Flávia Raquel Gonçalves, Carels, Nicolas
Publicado 2022

Martini: using literature keywords to compare gene sets

por Soldatos, Theodoros G., O’Donoghue, Seán I., Satagopam, Venkata P., Jensen, Lars J., Brown, Nigel P., Barbosa-Silva, Adriano, Schneider, Reinhard
Publicado 2010

Preimplantation development regulatory pathway construction through a text-mining approach

por Donnard, Elisa, Barbosa-Silva, Adriano, Guedes, Rafael LM, Fernandes, Gabriel R, Velloso, Henrique, Kohn, Matthew J, Andrade-Navarro, Miguel A, Ortega, J Miguel
Publicado 2011

LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships

por Barbosa-Silva, Adriano, Soldatos, Theodoros G, Magalhães, Ivan LF, Pavlopoulos, Georgios A, Fontaine, Jean-Fred, Andrade-Navarro, Miguel A, Schneider, Reinhard, Ortega, J Miguel
Publicado 2010

Caipirini: using gene sets to rank literature

por Soldatos, Theodoros G, O'Donoghue, Seán I, Satagopam, Venkata P, Barbosa-Silva, Adriano, Pavlopoulos, Georgios A, Wanderley-Nogueira, Ana Carolina, Soares-Cavalcanti, Nina Mota, Schneider, Reinhard
Publicado 2012

Data and knowledge management in translational research: implementation of the eTRIKS platform for the IMI OncoTrack consortium

por Gu, Wei, Yildirimman, Reha, Van der Stuyft, Emmanuel, Verbeeck, Denny, Herzinger, Sascha, Satagopam, Venkata, Barbosa-Silva, Adriano, Schneider, Reinhard, Lange, Bodo, Lehrach, Hans, Guo, Yike, Henderson, David, Rowe, Anthony
Publicado 2019

Presenting and sharing clinical data using the eTRIKS Standards Master Tree for tranSMART

por Barbosa-Silva, Adriano, Bratfalean, Dorina, Gu, Wei, Satagopam, Venkata, Houston, Paul, Becnel, Lauren B, Eifes, Serge, Richard, Fabien, Tielmann, Andreas, Herzinger, Sascha, Rege, Kavita, Balling, Rudi, Peeters, Paul, Schneider, Reinhard
Publicado 2019

Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae

por Brusamarello-Santos, Liziane Cristina Campos, Alberton, Dayane, Valdameri, Glaucio, Camilios-Neto, Doumit, Covre, Rafael, Lopes, Katia de Paiva, Zibetti Tadra-Sfeir, Michelle, Faoro, Helisson, Adele Monteiro, Rose, Barbosa-Silva, Adriano, John Broughton, William, Oliveira Pedrosa, Fabio, Wassem, Roseli, Souza, Emanuel Maltempi de
Publicado 2019