Genomic Footprints of Selective Sweeps from Metabolic Resistance to Pyrethroids in African Malaria Vectors Are Driven by Scale up of Insecticide-Based Vector Control

por Barnes, Kayla G., Weedall, Gareth D., Ndula, Miranda, Irving, Helen, Mzihalowa, Themba, Hemingway, Janet, Wondji, Charles S.
Publicado 2017

Widespread Pyrethroid and DDT Resistance in the Major Malaria Vector Anopheles funestus in East Africa Is Driven by Metabolic Resistance Mechanisms

por Mulamba, Charles, Riveron, Jacob M., Ibrahim, Sulaiman S., Irving, Helen, Barnes, Kayla G., Mukwaya, Louis G., Birungi, Josephine, Wondji, Charles S.
Publicado 2014

The highly polymorphic CYP6M7 cytochrome P450 gene partners with the directionally selected CYP6P9a and CYP6P9b genes to expand the pyrethroid resistance front in the malaria vecto...

por Riveron, Jacob M, Ibrahim, Sulaiman S, Chanda, Emmanuel, Mzilahowa, Themba, Cuamba, Nelson, Irving, Helen, Barnes, Kayla G, Ndula, Miranda, Wondji, Charles S
Publicado 2014

Rise of multiple insecticide resistance in Anopheles funestus in Malawi: a major concern for malaria vector control

por Riveron, Jacob M., Chiumia, Martin, Menze, Benjamin D., Barnes, Kayla G., Irving, Helen, Ibrahim, Sulaiman S., Weedall, Gareth D., Mzilahowa, Themba, Wondji, Charles S.
Publicado 2015

Acute rotavirus infection is associated with the induction of circulating memory CD4(+) T cell subsets

por Malamba-Banda, Chikondi, Mhango, Chimwemwe, Benedicto-Matambo, Prisca, Mandolo, Jonathan J., Chinyama, End, Kumwenda, Orpha, Barnes, Kayla G., Cunliffe, Nigel A., Iturriza-Gomara, Miren, Jambo, Kondwani C., Jere, Khuzwayo C.
Publicado 2023

Single-cell profiling of lncRNA expression during Ebola virus infection in rhesus macaques

por Santus, Luisa, Sopena-Rios, Maria, García-Pérez, Raquel, Lin, Aaron E., Adams, Gordon C., Barnes, Kayla G., Siddle, Katherine J., Wohl, Shirlee, Reverter, Ferran, Rinn, John L., Bennett, Richard S., Hensley, Lisa E., Sabeti, Pardis C., Melé, Marta
Publicado 2023

SNP Genotyping Identifies New Signatures of Selection in a Deep Sample of West African Plasmodium falciparum Malaria Parasites

por Amambua-Ngwa, Alfred, Park, Daniel J., Volkman, Sarah K., Barnes, Kayla G., Bei, Amy K., Lukens, Amanda K., Sene, Papa, Van Tyne, Daria, Ndiaye, Daouda, Wirth, Dyann F., Conway, David J., Neafsey, Daniel E., Schaffner, Stephen F.
Publicado 2012

Hybrid selection for sequencing pathogen genomes from clinical samples

por Melnikov, Alexandre, Galinsky, Kevin, Rogov, Peter, Fennell, Timothy, Van Tyne, Daria, Russ, Carsten, Daniels, Rachel, Barnes, Kayla G, Bochicchio, James, Ndiaye, Daouda, Sene, Papa D, Wirth, Dyann F, Nusbaum, Chad, Volkman, Sarah K, Birren, Bruce W, Gnirke, Andreas, Neafsey, Daniel E
Publicado 2011

Implementation of the Ebola Virus Persistence in Ocular Tissues and Fluids (EVICT) study: Lessons learned for vision health systems strengthening in Sierra Leone

por Shantha, Jessica G., Crozier, Ian, Kraft, Colleen S., Grant, Donald G., Goba, Augustine, Hayek, Brent R., Hartley, Caleb, Barnes, Kayla G., Uyeki, Timothy M., Schieffelin, John, Garry, Robert F., Bausch, Daniel G., Farmer, Paul E., Mattia, John G., Vandy, Matthew J., Yeh, Steven
Publicado 2021

Rotavirus Genotypes in Hospitalized Children With Acute Gastroenteritis Before and After Rotavirus Vaccine Introduction in Blantyre, Malawi, 1997–2019

por Mhango, Chimwemwe, Mandolo, Jonathan J, Chinyama, End, Wachepa, Richard, Kanjerwa, Oscar, Malamba-Banda, Chikondi, Matambo, Prisca B, Barnes, Kayla G, Chaguza, Chrispin, Shawa, Isaac T, Nyaga, Martin M, Hungerford, Daniel, Parashar, Umesh D, Pitzer, Virginia E, Kamng’ona, Arox W, Iturriza-Gomara, Miren, Cunliffe, Nigel A, Jere, Khuzwayo C
Publicado 2020

Retrospective Cohort Study of Lassa Fever in Pregnancy, Southern Nigeria

por Okogbenin, Sylvanus, Okoeguale, Joseph, Akpede, George, Colubri, Andres, Barnes, Kayla G., Mehta, Samar, Eifediyi, Reuben, Okogbo, Felix, Eigbefoh, Joseph, Momoh, Mojeed, Rafiu, Mojeed, Adomeh, Donatus, Odia, Ikponmwosa, Aire, Chris, Atafo, Rebecca, Okonofua, Martha, Pahlman, Meike, Becker-Ziaja, Beate, Asogun, Danny, Okokhere, Peter, Happi, Christian, Günther, Stephan, Sabeti, Pardis C., Ogbaini-Emovon, Ephraim
Publicado 2019

A comparison of four epidemic waves of COVID-19 in Malawi; an observational cohort study

por Anscombe, Catherine, Lissauer, Samantha, Thole, Herbert, Rylance, Jamie, Dula, Dingase, Menyere, Mavis, Kutambe, Belson, van der Veer, Charlotte, Phiri, Tamara, Banda, Ndaziona P., Mndolo, Kwazizira S., Mponda, Kelvin, Phiri, Chimota, Mallewa, Jane, Nyirenda, Mulinda, Katha, Grace, Mwandumba, Henry, Gordon, Stephen B., Jambo, Kondwani C., Cornick, Jennifer, Feasey, Nicholas, Barnes, Kayla G., Morton, Ben, Ashton, Philip M.
Publicado 2022

A comparison of four epidemic waves of COVID-19 in Malawi; an observational cohort study

por Anscombe, Catherine, Lissauer, Samantha, Thole, Herbert, Rylance, Jamie, Dula, Dingase, Menyere, Mavis, Kutambe, Belson, van der Veer, Charlotte, Phiri, Tamara, Banda, Ndaziona P., Mndolo, Kwazizira S., Mponda, Kelvin, Phiri, Chimota, Mallewa, Jane, Nyirenda, Mulinda, Katha, Grace, Mwandumba, Henry, Gordon, Stephen B., Jambo, Kondwani C., Cornick, Jennifer, Feasey, Nicholas, Barnes, Kayla G., Morton, Ben, Ashton, Philip M.
Publicado 2023

Comparative whole genome analysis reveals re-emergence of human Wa-like and DS-1-like G3 rotaviruses after Rotarix vaccine introduction in Malawi

por Mhango, Chimwemwe, Banda, Akuzike, Chinyama, End, Mandolo, Jonathan J, Kumwenda, Orpha, Malamba-Banda, Chikondi, Barnes, Kayla G, Kumwenda, Benjamin, Jambo, Kondwani C, Donato, Celeste M, Esona, Mathew D, Mwangi, Peter N, Steele, A Duncan, Iturriza-Gomara, Miren, Cunliffe, Nigel A, Ndze, Valentine N, Kamng’ona, Arox W, Dennis, Francis E, Nyaga, Martin M, Chaguza, Chrispin, Jere, Khuzwayo C
Publicado 2023

Distinct clinical and immunological profiles of patients with evidence of SARS-CoV-2 infection in sub-Saharan Africa

por Morton, Ben, Barnes, Kayla G., Anscombe, Catherine, Jere, Khuzwayo, Matambo, Prisca, Mandolo, Jonathan, Kamng’ona, Raphael, Brown, Comfort, Nyirenda, James, Phiri, Tamara, Banda, Ndaziona P., Van Der Veer, Charlotte, Mndolo, Kwazizira S., Mponda, Kelvin, Rylance, Jamie, Phiri, Chimota, Mallewa, Jane, Nyirenda, Mulinda, Katha, Grace, Kambiya, Paul, Jafali, James, Mwandumba, Henry C., Gordon, Stephen B., Cornick, Jennifer, Jambo, Kondwani C.
Publicado 2021

Different clinical features in Malawian outpatients presenting with COVID-19 prior to and during Omicron variant dominance: A prospective observational study

por Chibwana, Marah G., Thole, Herbert W., Anscombe, Cat, Ashton, Philip M., Green, Edward, Barnes, Kayla G., Cornick, Jen, Turner, Ann, Witte, Desiree, Nthala, Sharon, Thom, Chikondi, Kanyandula, Felistas, Ainani, Anna, Mtike, Natasha, Tambala, Hope, N’goma, Veronica, Mwafulirwa, Dorah, Asima, Erick, Morton, Ben, Gmeiner, Markus, Gundah, Zaziwe, Kawalazira, Gift, French, Neil, Feasey, Nicholas, Heyderman, Robert S., Swarthout, Todd D., Jambo, Kondwani C.
Publicado 2023

Utilizing river and wastewater as a SARS-CoV-2 surveillance tool in settings with limited formal sewage systems

por Barnes, Kayla G., Levy, Joshua I., Gauld, Jillian, Rigby, Jonathan, Kanjerwa, Oscar, Uzzell, Christopher B., Chilupsya, Chisomo, Anscombe, Catherine, Tomkins-Tinch, Christopher, Mbeti, Omar, Cairns, Edward, Thole, Herbert, McSweeney, Shannon, Chibwana, Marah G., Ashton, Philip M., Jere, Khuzwayo C., Meschke, John Scott, Diggle, Peter, Cornick, Jennifer, Chilima, Benjamin, Jambo, Kondwani, Andersen, Kristian G., Kawalazira, Gift, Paterson, Steve, Nyirenda, Tonney S., Feasey, Nicholas
Publicado 2023

Human cerebral malaria and Plasmodium falciparum genotypes in Malawi

por Milner, Danny A, Vareta, Jimmy, Valim, Clarissa, Montgomery, Jacqui, Daniels, Rachel F, Volkman, Sarah K, Neafsey, Daniel E, Park, Daniel J, Schaffner, Stephen F, Mahesh, Nira C, Barnes, Kayla G, Rosen, David M, Lukens, Amanda K, Van-Tyne, Daria, Wiegand, Roger C, Sabeti, Pardis C, Seydel, Karl B, Glover, Simon J, Kamiza, Steve, Molyneux, Malcolm E, Taylor, Terrie E, Wirth, Dyann F
Publicado 2012

Single-Cell Profiling of Ebola Virus Disease In Vivo Reveals Viral and Host Dynamics

por Kotliar, Dylan, Lin, Aaron E., Logue, James, Hughes, Travis K., Khoury, Nadine M., Raju, Siddharth S., Wadsworth, Marc H., Chen, Han, Kurtz, Jonathan R., Dighero-Kemp, Bonnie, Bjornson, Zach B., Mukherjee, Nilanjan, Sellers, Brian A., Tran, Nancy, Bauer, Matthew R., Adams, Gordon C., Adams, Ricky, Rinn, John L., Melé, Marta, Schaffner, Stephen F., Nolan, Garry P., Barnes, Kayla G., Hensley, Lisa E., McIlwain, David R., Shalek, Alex K., Sabeti, Pardis C., Bennett, Richard S.
Publicado 2020

Identification and Functional Validation of the Novel Antimalarial Resistance Locus PF10_0355 in Plasmodium falciparum

por Van Tyne, Daria, Park, Daniel J., Schaffner, Stephen F., Neafsey, Daniel E., Angelino, Elaine, Cortese, Joseph F., Barnes, Kayla G., Rosen, David M., Lukens, Amanda K., Daniels, Rachel F., Milner, Danny A., Johnson, Charles A., Shlyakhter, Ilya, Grossman, Sharon R., Becker, Justin S., Yamins, Daniel, Karlsson, Elinor K., Ndiaye, Daouda, Sarr, Ousmane, Mboup, Souleymane, Happi, Christian, Furlotte, Nicholas A., Eskin, Eleazar, Kang, Hyun Min, Hartl, Daniel L., Birren, Bruce W., Wiegand, Roger C., Lander, Eric S., Wirth, Dyann F., Volkman, Sarah K., Sabeti, Pardis C.
Publicado 2011