Natural variation in genes potentially involved in plant architecture and adaptation in switchgrass (Panicum virgatum L.)

por Bahri, Bochra A., Daverdin, Guillaume, Xu, Xiangyang, Cheng, Jan-Fang, Barry, Kerrie W., Brummer, E. Charles, Devos, Katrien M.
Publicado 2018

Salinity tolerance mechanisms of an Arctic Pelagophyte using comparative transcriptomic and gene expression analysis

por Freyria, Nastasia J., Kuo, Alan, Chovatia, Mansi, Johnson, Jenifer, Lipzen, Anna, Barry, Kerrie W., Grigoriev, Igor V., Lovejoy, Connie
Publicado 2022

The genetics of divergence and reproductive isolation between ecotypes of Panicum hallii

por Lowry, David B, Hernandez, Kyle, Taylor, Samuel H, Meyer, Eli, Logan, Tierney L, Barry, Kerrie W, Chapman, Jarrod A, Rokhsar, Daniel S, Schmutz, Jeremy, Juenger, Thomas E
Publicado 2015

Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus

por Casarrubia, Salvatore, Martino, Elena, Daghino, Stefania, Kohler, Annegret, Morin, Emmanuelle, Khouja, Hassine-Radhouane, Murat, Claude, Barry, Kerrie W., Lindquist, Erika A., Martin, Francis M., Perotto, Silvia
Publicado 2020

Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle

por Scully, Erin D., Geib, Scott M., Hoover, Kelli, Tien, Ming, Tringe, Susannah G., Barry, Kerrie W., Glavina del Rio, Tijana, Chovatia, Mansi, Herr, Joshua R., Carlson, John E.
Publicado 2013

Draft Genome Sequence of Coniochaeta ligniaria NRRL 30616, a Lignocellulolytic Fungus for Bioabatement of Inhibitors in Plant Biomass Hydrolysates

por Jiménez, Diego Javier, Hector, Ronald E., Riley, Robert, Lipzen, Anna, Kuo, Rita C., Amirebrahimi, Mojgan, Barry, Kerrie W., Grigoriev, Igor V., van Elsas, Jan Dirk, Nichols, Nancy N.
Publicado 2017

High-resolution mapping reveals hotspots and sex-biased recombination in Populus trichocarpa

por Abeyratne, Chanaka Roshan, Macaya-Sanz, David, Zhou, Ran, Barry, Kerrie W, Daum, Christopher, Haiby, Kathy, Lipzen, Anna, Stanton, Brian, Yoshinaga, Yuko, Zane, Matthew, Tuskan, Gerald A, DiFazio, Stephen P
Publicado 2022

Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9

por Dong, Oliver Xiaoou, Yu, Shu, Jain, Rashmi, Zhang, Nan, Duong, Phat Q., Butler, Corinne, Li, Yan, Lipzen, Anna, Martin, Joel A., Barry, Kerrie W., Schmutz, Jeremy, Tian, Li, Ronald, Pamela C.
Publicado 2020

Genomic Signatures of a Major Adaptive Event in the Pathogenic Fungus Melampsora larici-populina

por Persoons, Antoine, Maupetit, Agathe, Louet, Clémentine, Andrieux, Axelle, Lipzen, Anna, Barry, Kerrie W, Na, Hyunsoo, Adam, Catherine, Grigoriev, Igor V, Segura, Vincent, Duplessis, Sébastien, Frey, Pascal, Halkett, Fabien, De Mita, Stéphane
Publicado 2021

Desert truffle genomes reveal their reproductive modes and new insights into plant–fungal interaction and ectendomycorrhizal lifestyle

por Marqués‐Gálvez, José Eduardo, Miyauchi, Shingo, Paolocci, Francesco, Navarro‐Ródenas, Alfonso, Arenas, Francisco, Pérez‐Gilabert, Manuela, Morin, Emmanuelle, Auer, Lucas, Barry, Kerrie W., Kuo, Alan, Grigoriev, Igor V., Martin, Francis M., Kohler, Annegret, Morte, Asunción
Publicado 2020

Secretome Analysis from the Ectomycorrhizal Ascomycete Cenococcum geophilum

por de Freitas Pereira, Maíra, Veneault-Fourrey, Claire, Vion, Patrice, Guinet, Fréderic, Morin, Emmanuelle, Barry, Kerrie W., Lipzen, Anna, Singan, Vasanth, Pfister, Stephanie, Na, Hyunsoo, Kennedy, Megan, Egli, Simon, Grigoriev, Igor, Martin, Francis, Kohler, Annegret, Peter, Martina
Publicado 2018

Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle

por Murat, Claude, Kuo, Alan, Barry, Kerrie W., Clum, Alicia, Dockter, Rhyan B., Fauchery, Laure, Iotti, Mirco, Kohler, Annegret, LaButti, Kurt, Lindquist, Erika A., Lipzen, Anna, Morin, Emmanuelle, Wang, Mei, Grigoriev, Igor V., Zambonelli, Alessandra, Martin, Francis M.
Publicado 2018

Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors

por Lopez, David, Ribeiro, Sébastien, Label, Philippe, Fumanal, Boris, Venisse, Jean-Stéphane, Kohler, Annegret, de Oliveira, Ricardo R., Labutti, Kurt, Lipzen, Anna, Lail, Kathleen, Bauer, Diane, Ohm, Robin A., Barry, Kerrie W., Spatafora, Joseph, Grigoriev, Igor V., Martin, Francis M., Pujade-Renaud, Valérie
Publicado 2018

Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA

por Bewg, William P, Harding, Scott A, Engle, Nancy L, Vaidya, Brajesh N, Zhou, Ran, Reeves, Jacob, Horn, Thomas W, Joshee, Nirmal, Jenkins, Jerry W, Shu, Shengqiang, Barry, Kerrie W, Yoshinaga, Yuko, Grimwood, Jane, Schmitz, Robert J, Schmutz, Jeremy, Tschaplinski, Timothy J, Tsai, Chung-Jui
Publicado 2022

Complete genome sequence of Candidatus Ruthia magnifica

por Roeselers, Guus, Newton, Irene L. G., Woyke, Tanja, Auchtung, Thomas A., Dilly, Geoffrey F., Dutton, Rachel J., Fisher, Meredith C., Fontanez, Kristina M., Lau, Evan, Stewart, Frank J., Richardson, Paul M., Barry, Kerrie W., Saunders, Elizabeth, Detter, John C., Wu, Dongying, Eisen, Jonathan A., Cavanaugh, Colleen M.
Publicado 2010

An Insect Herbivore Microbiome with High Plant Biomass-Degrading Capacity

por Suen, Garret, Scott, Jarrod J., Aylward, Frank O., Adams, Sandra M., Tringe, Susannah G., Pinto-Tomás, Adrián A., Foster, Clifton E., Pauly, Markus, Weimer, Paul J., Barry, Kerrie W., Goodwin, Lynne A., Bouffard, Pascal, Li, Lewyn, Osterberger, Jolene, Harkins, Timothy T., Slater, Steven C., Donohue, Timothy J., Currie, Cameron R.
Publicado 2010

Experimentally Validated Reconstruction and Analysis of a Genome-Scale Metabolic Model of an Anaerobic Neocallimastigomycota Fungus

por Wilken, St. Elmo, Monk, Jonathan M., Leggieri, Patrick A., Lawson, Christopher E., Lankiewicz, Thomas S., Seppälä, Susanna, Daum, Chris G., Jenkins, Jerry, Lipzen, Anna M., Mondo, Stephen J., Barry, Kerrie W., Grigoriev, Igor V., Henske, John K., Theodorou, Michael K., Palsson, Bernhard O., Petzold, Linda R., O’Malley, Michelle A.
Publicado 2021

Genetic determinants of endophytism in the Arabidopsis root mycobiome

por Mesny, Fantin, Miyauchi, Shingo, Thiergart, Thorsten, Pickel, Brigitte, Atanasova, Lea, Karlsson, Magnus, Hüttel, Bruno, Barry, Kerrie W., Haridas, Sajeet, Chen, Cindy, Bauer, Diane, Andreopoulos, William, Pangilinan, Jasmyn, LaButti, Kurt, Riley, Robert, Lipzen, Anna, Clum, Alicia, Drula, Elodie, Henrissat, Bernard, Kohler, Annegret, Grigoriev, Igor V., Martin, Francis M., Hacquard, Stéphane
Publicado 2021

Expression of Aspergillus niger CAZymes is determined by compositional changes in wheat straw generated by hydrothermal or ionic liquid pretreatments

por Daly, Paul, van Munster, Jolanda M., Blythe, Martin J., Ibbett, Roger, Kokolski, Matt, Gaddipati, Sanyasi, Lindquist, Erika, Singan, Vasanth R., Barry, Kerrie W., Lipzen, Anna, Ngan, Chew Yee, Petzold, Christopher J., Chan, Leanne Jade G., Pullan, Steven T., Delmas, Stéphane, Waldron, Paul R., Grigoriev, Igor V., Tucker, Gregory A., Simmons, Blake A., Archer, David B.
Publicado 2017

Genome sequence of the model rice variety KitaakeX

por Jain, Rashmi, Jenkins, Jerry, Shu, Shengqiang, Chern, Mawsheng, Martin, Joel A., Copetti, Dario, Duong, Phat Q., Pham, Nikki T., Kudrna, David A., Talag, Jayson, Schackwitz, Wendy S., Lipzen, Anna M., Dilworth, David, Bauer, Diane, Grimwood, Jane, Nelson, Catherine R., Xing, Feng, Xie, Weibo, Barry, Kerrie W., Wing, Rod A., Schmutz, Jeremy, Li, Guotian, Ronald, Pamela C.
Publicado 2019