A new metabolic model of Drosophila melanogaster and the integrative analysis of Parkinson’s disease

por Cesur, Müberra Fatma, Basile, Arianna, Patil, Kiran Raosaheb, Çakır, Tunahan
Publicado 2023

KEMET – A python tool for KEGG Module evaluation and microbial genome annotation expansion

por Palù, Matteo, Basile, Arianna, Zampieri, Guido, Treu, Laura, Rossi, Alessandro, Morlino, Maria Silvia, Campanaro, Stefano
Publicado 2022

Analysis of the anaerobic digestion metagenome under environmental stresses stimulating prophage induction

por Rossi, Alessandro, Morlino, Maria Silvia, Gaspari, Maria, Basile, Arianna, Kougias, Panagiotis, Treu, Laura, Campanaro, Stefano
Publicado 2022

Genomic Comparison of Lactobacillus helveticus Strains Highlights Probiotic Potential

por Fontana, Alessandra, Falasconi, Irene, Molinari, Paola, Treu, Laura, Basile, Arianna, Vezzi, Alessandro, Campanaro, Stefano, Morelli, Lorenzo
Publicado 2019

Insights into Ammonia Adaptation and Methanogenic Precursor Oxidation by Genome-Centric Analysis

por Yan, Miao, Treu, Laura, Zhu, Xinyu, Tian, Hailin, Basile, Arianna, Fotidis, Ioannis A., Campanaro, Stefano, Angelidaki, Irini
Publicado 2020

Longitudinal flux balance analyses of a patient with episodic colonic inflammation reveals microbiome metabolic dynamics

por Basile, Arianna, Heinken, Almut, Hertel, Johannes, Smarr, Larry, Li, Weizhong, Treu, Laura, Valle, Giorgio, Campanaro, Stefano, Thiele, Ines
Publicado 2023

Integrating metagenomic binning with flux balance analysis to unravel syntrophies in anaerobic CO(2) methanation

por De Bernardini, Nicola, Basile, Arianna, Zampieri, Guido, Kovalovszki, Adam, De Diego Diaz, Beatrix, Offer, Elisabetta, Wongfaed, Nantharat, Angelidaki, Irini, Kougias, Panagiotis G., Campanaro, Stefano, Treu, Laura
Publicado 2022

New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters

por Campanaro, Stefano, Treu, Laura, Rodriguez-R, Luis M., Kovalovszki, Adam, Ziels, Ryan M., Maus, Irena, Zhu, Xinyu, Kougias, Panagiotis G., Basile, Arianna, Luo, Gang, Schlüter, Andreas, Konstantinidis, Konstantinos T., Angelidaki, Irini
Publicado 2020

APOLLO: A genome-scale metabolic reconstruction resource of 247,092 diverse human microbes spanning multiple continents, age groups, and body sites

por Heinken, Almut, Hulshof, Timothy Otto, Nap, Bram, Martinelli, Filippo, Basile, Arianna, O'Brolchain, Amy, O’Sullivan, Neil Francis, Gallagher, Celine, Magee, Eimer, McDonagh, Francesca, Lalor, Ian, Bergin, Maeve, Evans, Phoebe, Daly, Rachel, Farrell, Ronan, Delaney, Rose Marie, Hill, Saoirse, McAuliffe, Saoirse Roisin, Kilgannon, Trevor, Fleming, Ronan M.T., Thinnes, Cyrille C., Thiele, Ines
Publicado 2023