Optimising chemical named entity recognition with pre-processing analytics, knowledge-rich features and heuristics

por Batista-Navarro, Riza, Rak, Rafal, Ananiadou, Sophia
Publicado 2015

Argo: enabling the development of bespoke workflows and services for disease annotation

por Batista-Navarro, Riza, Carter, Jacob, Ananiadou, Sophia
Publicado 2016

Supporting the annotation of chronic obstructive pulmonary disease (COPD) phenotypes with text mining workflows

por Fu, Xiao, Batista-Navarro, Riza, Rak, Rafal, Ananiadou, Sophia
Publicado 2015

Using text mining techniques to extract phenotypic information from the PhenoCHF corpus

por Alnazzawi, Noha, Thompson, Paul, Batista-Navarro, Riza, Ananiadou, Sophia
Publicado 2015

Using uncertainty to link and rank evidence from biomedical literature for model curation

por Zerva, Chrysoula, Batista-Navarro, Riza, Day, Philip, Ananiadou, Sophia
Publicado 2017

Processing biological literature with customizable Web services supporting interoperable formats

por Rak, Rafal, Batista-Navarro, Riza Theresa, Carter, Jacob, Rowley, Andrew, Ananiadou, Sophia
Publicado 2014

Text-mining-assisted biocuration workflows in Argo

por Rak, Rafal, Batista-Navarro, Riza Theresa, Rowley, Andrew, Carter, Jacob, Ananiadou, Sophia
Publicado 2014

Constructing a biodiversity terminological inventory

por Nguyen, Nhung T. H., Soto, Axel J., Kontonatsios, Georgios, Batista-Navarro, Riza, Ananiadou, Sophia
Publicado 2017

Identification of research hypotheses and new knowledge from scientific literature

por Shardlow, Matthew, Batista-Navarro, Riza, Thompson, Paul, Nawaz, Raheel, McNaught, John, Ananiadou, Sophia
Publicado 2018

Annotation and detection of drug effects in text for pharmacovigilance

por Thompson, Paul, Daikou, Sophia, Ueno, Kenju, Batista-Navarro, Riza, Tsujii, Jun’ichi, Ananiadou, Sophia
Publicado 2018

Detecting experimental techniques and selecting relevant documents for protein-protein interactions from biomedical literature

por Wang, Xinglong, Rak, Rafal, Restificar, Angelo, Nobata, Chikashi, Rupp, CJ, Batista-Navarro, Riza Theresa B, Nawaz, Raheel, Ananiadou, Sophia
Publicado 2011

Origin of the Aromatic Group of Cultivated Rice (Oryza sativa L.) Traced to the Indian Subcontinent

por Civáň, Peter, Ali, Sajid, Batista-Navarro, Riza, Drosou, Konstantina, Ihejieto, Chioma, Chakraborty, Debarati, Ray, Avik, Gladieux, Pierre, Brown, Terence A
Publicado 2019

Text Mining the History of Medicine

por Thompson, Paul, Batista-Navarro, Riza Theresa, Kontonatsios, Georgios, Carter, Jacob, Toon, Elizabeth, McNaught, John, Timmermann, Carsten, Worboys, Michael, Ananiadou, Sophia
Publicado 2016

SciLite: a platform for displaying text-mined annotations as a means to link research articles with biological data

por Venkatesan, Aravind, Kim, Jee-Hyub, Talo, Francesco, Ide-Smith, Michele, Gobeill, Julien, Carter, Jacob, Batista-Navarro, Riza, Ananiadou, Sophia, Ruch, Patrick, McEntyre, Johanna
Publicado 2017

biochem4j: Integrated and extensible biochemical knowledge through graph databases

por Swainston, Neil, Batista-Navarro, Riza, Carbonell, Pablo, Dobson, Paul D., Dunstan, Mark, Jervis, Adrian J., Vinaixa, Maria, Williams, Alan R., Ananiadou, Sophia, Faulon, Jean-Loup, Mendes, Pedro, Kell, Douglas B., Scrutton, Nigel S., Breitling, Rainer
Publicado 2017

BioC interoperability track overview

por Comeau, Donald C., Batista-Navarro, Riza Theresa, Dai, Hong-Jie, Islamaj Doğan, Rezarta, Jimeno Yepes, Antonio, Khare, Ritu, Lu, Zhiyong, Marques, Hernani, Mattingly, Carolyn J., Neves, Mariana, Peng, Yifan, Rak, Rafal, Rinaldi, Fabio, Tsai, Richard Tzong-Han, Verspoor, Karin, Wiegers, Thomas C., Wu, Cathy H., Wilbur, W. John
Publicado 2014

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID

por Kim, Sun, Islamaj Doğan, Rezarta, Chatr-Aryamontri, Andrew, Chang, Christie S., Oughtred, Rose, Rust, Jennifer, Batista-Navarro, Riza, Carter, Jacob, Ananiadou, Sophia, Matos, Sérgio, Santos, André, Campos, David, Oliveira, José Luís, Singh, Onkar, Jonnagaddala, Jitendra, Dai, Hong-Jie, Su, Emily Chia-Yu, Chang, Yung-Chun, Su, Yu-Chen, Chu, Chun-Han, Chen, Chien Chin, Hsu, Wen-Lian, Peng, Yifan, Arighi, Cecilia, Wu, Cathy H., Vijay-Shanker, K., Aydın, Ferhat, Hüsünbeyi, Zehra Melce, Özgür, Arzucan, Shin, Soo-Yong, Kwon, Dongseop, Dolinski, Kara, Tyers, Mike, Wilbur, W. John, Comeau, Donald C.
Publicado 2016

The CHEMDNER corpus of chemicals and drugs and its annotation principles

por Krallinger, Martin, Rabal, Obdulia, Leitner, Florian, Vazquez, Miguel, Salgado, David, Lu, Zhiyong, Leaman, Robert, Lu, Yanan, Ji, Donghong, Lowe, Daniel M, Sayle, Roger A, Batista-Navarro, Riza Theresa, Rak, Rafal, Huber, Torsten, Rocktäschel, Tim, Matos, Sérgio, Campos, David, Tang, Buzhou, Xu, Hua, Munkhdalai, Tsendsuren, Ryu, Keun Ho, Ramanan, SV, Nathan, Senthil, Žitnik, Slavko, Bajec, Marko, Weber, Lutz, Irmer, Matthias, Akhondi, Saber A, Kors, Jan A, Xu, Shuo, An, Xin, Sikdar, Utpal Kumar, Ekbal, Asif, Yoshioka, Masaharu, Dieb, Thaer M, Choi, Miji, Verspoor, Karin, Khabsa, Madian, Giles, C Lee, Liu, Hongfang, Ravikumar, Komandur Elayavilli, Lamurias, Andre, Couto, Francisco M, Dai, Hong-Jie, Tsai, Richard Tzong-Han, Ata, Caglar, Can, Tolga, Usié, Anabel, Alves, Rui, Segura-Bedmar, Isabel, Martínez, Paloma, Oyarzabal, Julen, Valencia, Alfonso
Publicado 2015

Overview of the interactive task in BioCreative V

por Wang, Qinghua, S. Abdul, Shabbir, Almeida, Lara, Ananiadou, Sophia, Balderas-Martínez, Yalbi I., Batista-Navarro, Riza, Campos, David, Chilton, Lucy, Chou, Hui-Jou, Contreras, Gabriela, Cooper, Laurel, Dai, Hong-Jie, Ferrell, Barbra, Fluck, Juliane, Gama-Castro, Socorro, George, Nancy, Gkoutos, Georgios, Irin, Afroza K., Jensen, Lars J., Jimenez, Silvia, Jue, Toni R., Keseler, Ingrid, Madan, Sumit, Matos, Sérgio, McQuilton, Peter, Milacic, Marija, Mort, Matthew, Natarajan, Jeyakumar, Pafilis, Evangelos, Pereira, Emiliano, Rao, Shruti, Rinaldi, Fabio, Rothfels, Karen, Salgado, David, Silva, Raquel M., Singh, Onkar, Stefancsik, Raymund, Su, Chu-Hsien, Subramani, Suresh, Tadepally, Hamsa D., Tsaprouni, Loukia, Vasilevsky, Nicole, Wang, Xiaodong, Chatr-Aryamontri, Andrew, Laulederkind, Stanley J. F., Matis-Mitchell, Sherri, McEntyre, Johanna, Orchard, Sandra, Pundir, Sangya, Rodriguez-Esteban, Raul, Van Auken, Kimberly, Lu, Zhiyong, Schaeffer, Mary, Wu, Cathy H., Hirschman, Lynette, Arighi, Cecilia N.
Publicado 2016