Using sequence signatures and kink-turn motifs in knowledge-based statistical potentials for RNA structure prediction

por Bayrak, Cigdem Sevim, Kim, Namhee, Schlick, Tamar
Publicado 2017

Dual Graph Partitioning Highlights a Small Group of Pseudoknot-Containing RNA Submotifs

por Jain, Swati, Bayrak, Cigdem S., Petingi, Louis, Schlick, Tamar
Publicado 2018

RAG-3D: a search tool for RNA 3D substructures

por Zahran, Mai, Sevim Bayrak, Cigdem, Elmetwaly, Shereef, Schlick, Tamar
Publicado 2015

De novo variants in exomes of congenital heart disease patients identify risk genes and pathways

por Sevim Bayrak, Cigdem, Zhang, Peng, Tristani-Firouzi, Martin, Gelb, Bruce D., Itan, Yuval
Publicado 2020

A comprehensive knowledgebase of known and predicted human genetic variants associated with COVID-19 susceptibility and severity

por Kars, Meltem Ece, Stein, David, Bayrak, Cigdem Sevim, Stenson, Peter, Cooper, David, Itan, Yuval
Publicado 2023

Genome-wide prediction of pathogenic gain- and loss-of-function variants from ensemble learning of a diverse feature set

por Stein, David, Kars, Meltem Ece, Wu, Yiming, Bayrak, Çiğdem Sevim, Stenson, Peter D., Cooper, David N., Schlessinger, Avner, Itan, Yuval
Publicado 2023

Identifying high-impact variants and genes in exomes of Ashkenazi Jewish inflammatory bowel disease patients

por Wu, Yiming, Gettler, Kyle, Kars, Meltem Ece, Giri, Mamta, Li, Dalin, Bayrak, Cigdem Sevim, Zhang, Peng, Jain, Aayushee, Maffucci, Patrick, Sabic, Ksenija, Van Vleck, Tielman, Nadkarni, Girish, Denson, Lee A., Ostrer, Harry, Levine, Adam P., Schiff, Elena R., Segal, Anthony W., Kugathasan, Subra, Stenson, Peter D., Cooper, David N., Philip Schumm, L., Snapper, Scott, Daly, Mark J., Haritunians, Talin, Duerr, Richard H., Silverberg, Mark S., Rioux, John D., Brant, Steven R., McGovern, Dermot P. B., Cho, Judy H., Itan, Yuval
Publicado 2023