Natural Selection in Synthetic Communities Highlights the Roles of Methylococcaceae and Methylophilaceae and Suggests Differential Roles for Alternative Methanol Dehydrogenases in...

por Yu, Zheng, Beck, David A. C., Chistoserdova, Ludmila
Publicado 2017

Difference in C(3)–C(4) metabolism underlies tradeoff between growth rate and biomass yield in Methylobacterium extorquens AM1

por Fu, Yanfen, Beck, David A. C., Lidstrom, Mary E.
Publicado 2016

MxaY regulates the lanthanide-mediated methanol dehydrogenase switch in Methylomicrobium buryatense

por Chu, Frances, Beck, David A.C., Lidstrom, Mary E.
Publicado 2016

Attention-based generative models for de novo molecular design

por Dollar, Orion, Joshi, Nisarg, Beck, David A. C., Pfaendtner, Jim
Publicado 2021

Oxygen availability is a major factor in determining the composition of microbial communities involved in methane oxidation

por Hernandez, Maria E., Beck, David A.C., Lidstrom, Mary E., Chistoserdova, Ludmila
Publicado 2015

A Synthetic Ecology Perspective: How Well Does Behavior of Model Organisms in the Laboratory Predict Microbial Activities in Natural Habitats?

por Yu, Zheng, Krause, Sascha M. B., Beck, David A. C., Chistoserdova, Ludmila
Publicado 2016

DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies

por Ziels, Ryan M, Sousa, Diana Z, Stensel, H David, Beck, David A C
Publicado 2018

Core Metabolism Shifts during Growth on Methanol versus Methane in the Methanotroph Methylomicrobium buryatense 5GB1

por Fu, Yanfen, He, Lian, Reeve, Jennifer, Beck, David A. C., Lidstrom, Mary E.
Publicado 2019

Deep Sequencing of Porphyromonas gingivalis and Comparative Transcriptome Analysis of a LuxS Mutant

por Hirano, Takanori, Beck, David A. C., Demuth, Donald R., Hackett, Murray, Lamont, Richard J.
Publicado 2012

Comparative transcriptomics in three Methylophilaceae species uncover different strategies for environmental adaptation

por Vorobev, Alexey, Beck, David A.C., Kalyuzhnaya, Marina G., Lidstrom, Mary E., Chistoserdova, Ludmila
Publicado 2013

C(1)-Pathways in Methyloversatilis universalis FAM5: Genome Wide Gene Expression and Mutagenesis Studies

por Good, Nathan M., Lamb, Andrew, Beck, David A. C., Martinez-Gomez, N. Cecilia, Kalyuzhnaya, Marina G.
Publicado 2015

Mass-Suite: a novel open-source python package for high-resolution mass spectrometry data analysis

por Hu, Ximin, Mar, Derek, Suzuki, Nozomi, Zhang, Bowei, Peter, Katherine T., Beck, David A. C., Kolodziej, Edward P.
Publicado 2023

Homologous Pairs of Low and High Temperature Originating Proteins Spanning the Known Prokaryotic Universe

por Komp, Evan, Alanzi, Humood N., Francis, Ryan, Vuong, Chau, Roberts, Logan, Mosallanejad, Amin, Beck, David A. C.
Publicado 2023

Author Correction: Homologous Pairs of Low and High Temperature Originating Proteins Spanning the Known Prokaryotic Universe

por Komp, Evan, Alanzi, Humood N., Francis, Ryan, Vuong, Chau, Roberts, Logan, Mosallanejad, Amin, Beck, David A. C.
Publicado 2023

Insights into Dynamic Polymicrobial Synergy Revealed by Time-Coursed RNA-Seq

por Hendrickson, Erik L., Beck, David A. C., Miller, Daniel P., Wang, Qian, Whiteley, Marvin, Lamont, Richard J., Hackett, Murray
Publicado 2017

A methanotrophic bacterium to enable methane removal for climate mitigation

por He, Lian, Groom, Joseph D., Wilson, Erin H., Fernandez, Janette, Konopka, Michael C., Beck, David A. C., Lidstrom, Mary E.
Publicado 2023

Proteomics of Fusobacterium nucleatum within a model developing oral microbial community

por Hendrickson, Erik L, Wang, Tiansong, Beck, David A C, Dickinson, Brittany C, Wright, Christopher J, J Lamont, Richard, Hackett, Murray
Publicado 2014

Comprehensive molecular characterization of Methylobacterium extorquens AM1 adapted for 1-butanol tolerance

por Hu, Bo, Yang, Yi-Ming, Beck, David A. C., Wang, Qian-Wen, Chen, Wen-Jing, Yang, Jing, Lidstrom, Mary E., Yang, Song
Publicado 2016

Genomics of Methylotrophy in Gram-Positive Methylamine-Utilizing Bacteria

por McTaggart, Tami L., Beck, David A. C., Setboonsarng, Usanisa, Shapiro, Nicole, Woyke, Tanja, Lidstrom, Mary E., Kalyuzhnaya, Marina G., Chistoserdova, Ludmila
Publicado 2015

A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae

por Beck, David A.C., Kalyuzhnaya, Marina G., Malfatti, Stephanie, Tringe, Susannah G., Glavina del Rio, Tijana, Ivanova, Natalia, Lidstrom, Mary E., Chistoserdova, Ludmila
Publicado 2013