Protocol for single-cell isolation and genome amplification of environmental microbial eukaryotes for genomic analysis

por Ciobanu, Doina, Chan, Sandy, Ahrendt, Steven, Quandt, C. Alisha, Benny, Gerald L., Smith, Matthew E., James, Timothy Y., Cheng, Jan-Fang
Publicado 2022

Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi

por Reynolds, Nicole K, Stajich, Jason E, Benny, Gerald L, Barry, Kerrie, Mondo, Stephen, LaButti, Kurt, Lipzen, Anna, Daum, Chris, Grigoriev, Igor V, Ho, Hsiao-Man, Crous, Pedro W, Spatafora, Joseph W, Smith, Matthew E
Publicado 2023

Leveraging single-cell genomics to expand the fungal tree of life

por Ahrendt, Steven R., Quandt, C. Alisha, Ciobanu, Doina, Clum, Alicia, Salamov, Asaf, Andreopoulos, Bill, Cheng, Jan-Fang, Woyke, Tanja, Pelin, Adrian, Henrissat, Bernard, Reynolds, Nicole K., Benny, Gerald L., Smith, Matthew E., James, Timothy Y., Grigoriev, Igor V.
Publicado 2018

A single-cell genomics pipeline for environmental microbial eukaryotes

por Ciobanu, Doina, Clum, Alicia, Ahrendt, Steven, Andreopoulos, William B., Salamov, Asaf, Chan, Sandy, Quandt, C. Alisha, Foster, Brian, Meier-Kolthoff, Jan P., Tang, Yung Tsu, Schwientek, Patrick, Benny, Gerald L., Smith, Matthew E., Bauer, Diane, Deshpande, Shweta, Barry, Kerrie, Copeland, Alex, Singer, Steven W., Woyke, Tanja, Grigoriev, Igor V., James, Timothy Y., Cheng, Jan-Fang
Publicado 2021

Evolution of zygomycete secretomes and the origins of terrestrial fungal ecologies

por Chang, Ying, Wang, Yan, Mondo, Stephen, Ahrendt, Steven, Andreopoulos, William, Barry, Kerrie, Beard, Jeff, Benny, Gerald L., Blankenship, Sabrina, Bonito, Gregory, Cuomo, Christina, Desiro, Alessandro, Gervers, Kyle A., Hundley, Hope, Kuo, Alan, LaButti, Kurt, Lang, B. Franz, Lipzen, Anna, O’Donnell, Kerry, Pangilinan, Jasmyn, Reynolds, Nicole, Sandor, Laura, Smith, Matthew E., Tsang, Adrian, Grigoriev, Igor V., Stajich, Jason E., Spatafora, Joseph W.
Publicado 2022

Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?

por Gryganskyi, Andrii P., Golan, Jacob, Muszewska, Anna, Idnurm, Alexander, Dolatabadi, Somayeh, Mondo, Stephen J., Kutovenko, Vira B., Kutovenko, Volodymyr O., Gajdeczka, Michael T., Anishchenko, Iryna M., Pawlowska, Julia, Tran, Ngoc Vinh, Ebersberger, Ingo, Voigt, Kerstin, Wang, Yan, Chang, Ying, Pawlowska, Teresa E., Heitman, Joseph, Vilgalys, Rytas, Bonito, Gregory, Benny, Gerald L., Smith, Matthew E., Reynolds, Nicole, James, Timothy Y., Grigoriev, Igor V., Spatafora, Joseph W., Stajich, Jason E.
Publicado 2023