A Proteome-Centric View of Ageing, including that of the Skin and Age-Related Diseases: Considerations of a Common Cause and Common Preventative and Curative Interventions

por Benoit, Isabelle, Burty-Valin, Elodie, Radman, Miroslav
Publicado 2023

Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin

por Benoit, Isabelle, Coutinho, Pedro M, Schols, Henk A, Gerlach, Jan P, Henrissat, Bernard, de Vries, Ronald P
Publicado 2012

Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level

por Battaglia, Evy, Benoit, Isabelle, van den Brink, Joost, Wiebenga, Ad, Coutinho, Pedro M, Henrissat, Bernard, de Vries, Ronald P
Publicado 2011

A genomic survey of proteases in Aspergilli

por Budak, Sebnem Ozturkoglu, Zhou, Miaomiao, Brouwer, Carlo, Wiebenga, Ad, Benoit, Isabelle, Di Falco, Marcos, Tsang, Adrian, de Vries, Ronald P
Publicado 2014

Post-genomic approaches to understanding interactions between fungi and their environment

por de Vries, Ronald P., Benoit, Isabelle, Doehlemann, Gunther, Kobayashi, Tetsuo, Magnuson, Jon K., Panisko, Ellen A., Baker, Scott E., Lebrun, Marc-Henri
Publicado 2011

Enhancing saccharification of wheat straw by mixing enzymes from genetically-modified Trichoderma reesei and Aspergillus niger

por Jiang, Yanping, Duarte, Alexandra Vivas, van den Brink, Joost, Wiebenga, Ad, Zou, Gen, Wang, Chengshu, de Vries, Ronald P., Zhou, Zhihua, Benoit, Isabelle
Publicado 2015

Spatial differentiation of gene expression in Aspergillus niger colony grown for sugar beet pulp utilization

por Benoit, Isabelle, Zhou, Miaomiao, Vivas Duarte, Alexandra, Downes, Damien J., Todd, Richard B., Kloezen, Wendy, Post, Harm, Heck, Albert J. R., Maarten Altelaar, A. F., de Vries, Ronald P.
Publicado 2015

The genome of the white-rot fungus Pycnoporus cinnabarinus: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown

por Levasseur, Anthony, Lomascolo, Anne, Chabrol, Olivier, Ruiz-Dueñas, Francisco J, Boukhris-Uzan, Eva, Piumi, François, Kües, Ursula, Ram, Arthur F J, Murat, Claude, Haon, Mireille, Benoit, Isabelle, Arfi, Yonathan, Chevret, Didier, Drula, Elodie, Jin Kwon, Min, Gouret, Philippe, Lesage-Meessen, Laurence, Lombard, Vincent, Mariette, Jérôme, Noirot, Céline, Park, Joohae, Patyshakuliyeva, Aleksandrina, Sigoillot, Jean Claude, Wiebenga, Ad, Wösten, Han A B, Martin, Francis, Coutinho, Pedro M, de Vries, Ronald P, Martínez, Angel T, Klopp, Christophe, Pontarotti, Pierre, Henrissat, Bernard, Record, Eric
Publicado 2014

Closely related fungi employ diverse enzymatic strategies to degrade plant biomass

por Benoit, Isabelle, Culleton, Helena, Zhou, Miaomiao, DiFalco, Marcos, Aguilar-Osorio, Guillermo, Battaglia, Evy, Bouzid, Ourdia, Brouwer, Carlo P J M, El-Bushari, Hala B O, Coutinho, Pedro M, Gruben, Birgit S, Hildén, Kristiina S, Houbraken, Jos, Barboza, Luis Alexis Jiménez, Levasseur, Anthony, Majoor, Eline, Mäkelä, Miia R, Narang, Hari-Mander, Trejo-Aguilar, Blanca, van den Brink, Joost, vanKuyk, Patricia A, Wiebenga, Ad, McKie, Vincent, McCleary, Barry, Tsang, Adrian, Henrissat, Bernard, de Vries, Ronald P
Publicado 2015

Genomic Analysis of the Necrotrophic Fungal Pathogens Sclerotinia sclerotiorum and Botrytis cinerea

por Amselem, Joelle, Cuomo, Christina A., van Kan, Jan A. L., Viaud, Muriel, Benito, Ernesto P., Couloux, Arnaud, Coutinho, Pedro M., de Vries, Ronald P., Dyer, Paul S., Fillinger, Sabine, Fournier, Elisabeth, Gout, Lilian, Hahn, Matthias, Kohn, Linda, Lapalu, Nicolas, Plummer, Kim M., Pradier, Jean-Marc, Quévillon, Emmanuel, Sharon, Amir, Simon, Adeline, ten Have, Arjen, Tudzynski, Bettina, Tudzynski, Paul, Wincker, Patrick, Andrew, Marion, Anthouard, Véronique, Beever, Ross E., Beffa, Rolland, Benoit, Isabelle, Bouzid, Ourdia, Brault, Baptiste, Chen, Zehua, Choquer, Mathias, Collémare, Jérome, Cotton, Pascale, Danchin, Etienne G., Da Silva, Corinne, Gautier, Angélique, Giraud, Corinne, Giraud, Tatiana, Gonzalez, Celedonio, Grossetete, Sandrine, Güldener, Ulrich, Henrissat, Bernard, Howlett, Barbara J., Kodira, Chinnappa, Kretschmer, Matthias, Lappartient, Anne, Leroch, Michaela, Levis, Caroline, Mauceli, Evan, Neuvéglise, Cécile, Oeser, Birgitt, Pearson, Matthew, Poulain, Julie, Poussereau, Nathalie, Quesneville, Hadi, Rascle, Christine, Schumacher, Julia, Ségurens, Béatrice, Sexton, Adrienne, Silva, Evelyn, Sirven, Catherine, Soanes, Darren M., Talbot, Nicholas J., Templeton, Matt, Yandava, Chandri, Yarden, Oded, Zeng, Qiandong, Rollins, Jeffrey A., Lebrun, Marc-Henri, Dickman, Marty
Publicado 2011

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

por de Vries, Ronald P., Riley, Robert, Wiebenga, Ad, Aguilar-Osorio, Guillermo, Amillis, Sotiris, Uchima, Cristiane Akemi, Anderluh, Gregor, Asadollahi, Mojtaba, Askin, Marion, Barry, Kerrie, Battaglia, Evy, Bayram, Özgür, Benocci, Tiziano, Braus-Stromeyer, Susanna A., Caldana, Camila, Cánovas, David, Cerqueira, Gustavo C., Chen, Fusheng, Chen, Wanping, Choi, Cindy, Clum, Alicia, dos Santos, Renato Augusto Corrêa, Damásio, André Ricardo de Lima, Diallinas, George, Emri, Tamás, Fekete, Erzsébet, Flipphi, Michel, Freyberg, Susanne, Gallo, Antonia, Gournas, Christos, Habgood, Rob, Hainaut, Matthieu, Harispe, María Laura, Henrissat, Bernard, Hildén, Kristiina S., Hope, Ryan, Hossain, Abeer, Karabika, Eugenia, Karaffa, Levente, Karányi, Zsolt, Kraševec, Nada, Kuo, Alan, Kusch, Harald, LaButti, Kurt, Lagendijk, Ellen L., Lapidus, Alla, Levasseur, Anthony, Lindquist, Erika, Lipzen, Anna, Logrieco, Antonio F., MacCabe, Andrew, Mäkelä, Miia R., Malavazi, Iran, Melin, Petter, Meyer, Vera, Mielnichuk, Natalia, Miskei, Márton, Molnár, Ákos P., Mulé, Giuseppina, Ngan, Chew Yee, Orejas, Margarita, Orosz, Erzsébet, Ouedraogo, Jean Paul, Overkamp, Karin M., Park, Hee-Soo, Perrone, Giancarlo, Piumi, Francois, Punt, Peter J., Ram, Arthur F. J., Ramón, Ana, Rauscher, Stefan, Record, Eric, Riaño-Pachón, Diego Mauricio, Robert, Vincent, Röhrig, Julian, Ruller, Roberto, Salamov, Asaf, Salih, Nadhira S., Samson, Rob A., Sándor, Erzsébet, Sanguinetti, Manuel, Schütze, Tabea, Sepčić, Kristina, Shelest, Ekaterina, Sherlock, Gavin, Sophianopoulou, Vicky, Squina, Fabio M., Sun, Hui, Susca, Antonia, Todd, Richard B., Tsang, Adrian, Unkles, Shiela E., van de Wiele, Nathalie, van Rossen-Uffink, Diana, Oliveira, Juliana Velasco de Castro, Vesth, Tammi C., Visser, Jaap, Yu, Jae-Hyuk, Zhou, Miaomiao, Andersen, Mikael R., Archer, David B., Baker, Scott E., Benoit, Isabelle, Brakhage, Axel A., Braus, Gerhard H., Fischer, Reinhard, Frisvad, Jens C., Goldman, Gustavo H., Houbraken, Jos, Oakley, Berl, Pócsi, István, Scazzocchio, Claudio, Seiboth, Bernhard, vanKuyk, Patricia A., Wortman, Jennifer, Dyer, Paul S., Grigoriev, Igor V.
Publicado 2017