Compartment and hub definitions tune metabolic networks for metabolomic interpretations

por Waller, T Cameron, Berg, Jordan A, Lex, Alexander, Chapman, Brian E, Rutter, Jared
Publicado 2020

XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data

por Berg, Jordan A., Belyeu, Jonathan R., Morgan, Jeffrey T., Ouyang, Yeyun, Bott, Alex J., Quinlan, Aaron R., Gertz, Jason, Rutter, Jared
Publicado 2020

Genome Sequences of Five Additional Brevibacillus laterosporus Bacteriophages

por Merrill, Bryan D., Berg, Jordan A., Graves, Kiel A., Ward, Andy T., Hilton, Jared A., Wake, Braden N., Grose, Julianne H., Breakwell, Donald P., Burnett, Sandra H.
Publicado 2015

PGC-1β and ERRα Promote Glutamine Metabolism and Colorectal Cancer Survival via Transcriptional Upregulation of PCK2

por Frodyma, Danielle E., Troia, Thomas C., Rao, Chaitra, Svoboda, Robert A., Berg, Jordan A., Shinde, Dhananjay D., Thomas, Vinai C., Lewis, Robert E., Fisher, Kurt W.
Publicado 2022

Metaboverse enables automated discovery and visualization of diverse metabolic regulatory patterns

por Berg, Jordan A., Zhou, Youjia, Ouyang, Yeyun, Cluntun, Ahmad A., Waller, T. Cameron, Conway, Megan E., Nowinski, Sara M., Van Ry, Tyler, George, Ian, Cox, James E., Wang, Bei, Rutter, Jared
Publicado 2023

Characterization of Five Novel Brevibacillus Bacteriophages and Genomic Comparison of Brevibacillus Phages

por Berg, Jordan A., Merrill, Bryan D., Crockett, Justin T., Esplin, Kyle P., Evans, Marlee R., Heaton, Karli E., Hilton, Jared A., Hyde, Jonathan R., McBride, Morgan S., Schouten, Jordan T., Simister, Austin R., Thurgood, Trever L., Ward, Andrew T., Breakwell, Donald P., Hope, Sandra, Grose, Julianne H.
Publicado 2016

Mitochondrial fatty acid synthesis coordinates oxidative metabolism in mammalian mitochondria

por Nowinski, Sara M, Solmonson, Ashley, Rusin, Scott F, Maschek, J Alan, Bensard, Claire L, Fogarty, Sarah, Jeong, Mi-Young, Lettlova, Sandra, Berg, Jordan A, Morgan, Jeffrey T, Ouyang, Yeyun, Naylor, Bradley C, Paulo, Joao A, Funai, Katsuhiko, Cox, James E, Gygi, Steven P, Winge, Dennis R, DeBerardinis, Ralph J, Rutter, Jared
Publicado 2020

Complete Genome Sequences of Paenibacillus larvae Phages BN12, Dragolir, Kiel007, Leyra, Likha, Pagassa, PBL1c, and Tadhana

por Walker, Jamison K., Merrill, Bryan D., Berg, Jordan A., Dhalai, Aziza, Dingman, Douglas W., Fajardo, Chris P., Graves, Kiel, Hill, Hunter L., Hilton, Jared A., Imahara, Cameron, Knabe, Bradley K., Mangohig, James, Monk, Josh, Mun, Heejin, Payne, Ashley M., Salisbury, Alicia, Stamereilers, Casey, Velez, Kathie, Ward, Andy T., Breakwell, Donald P., Grose, Julianne H., Hope, Sandra, Tsourkas, Philippos K.
Publicado 2018

The microenvironment dictates glycocalyx construction and immune surveillance

por Tharp, Kevin M., Park, Sangwoo, Timblin, Greg A., Richards, Alicia L., Berg, Jordan A., Twells, Nicholas M., Riley, Nicholas M., Peltan, Egan L., Shon, D. Judy, Stevenson, Erica, Tsui, Kimberly, Palomba, Francesco, Lefebvre, Austin E. Y. T., Soens, Ross W., Ayad, Nadia M.E., Hoeve-Scott, Johanna ten, Healy, Kevin, Digman, Michelle, Dillin, Andrew, Bertozzi, Carolyn R., Swaney, Danielle L., Mahal, Lara K., Cantor, Jason R., Paszek, Matthew J., Weaver, Valerie M.
Publicado 2023

Genome Sequences of Nine Erwinia amylovora Bacteriophages

por Sharma, Ruchira, Berg, Jordan A., Beatty, Nolan J., Choi, Minsey C., Cowger, Ashlin E., Cozzens, Brooke J. R., Duncan, Steven G., Fajardo, Christopher P., Ferguson, Hannah P., Galbraith, Trevon, Herring, Jacob A., Hoj, Taalin R., Durrant, Jill L., Hyde, Jonathan R., Jensen, Garrett L., Ke, Si Yang, Killpack, Shalee, Kruger, Jared L., Lawrence, Eliza E. K., Nwosu, Ifeanyichukwu O., Tam, Tsz Ching, Thompson, Daniel W., Tueller, Josie A., Ward, Megan E. H., Webb, Charles J., Wood, Madison E., Yeates, Edward L., Baltrus, David A., Breakwell, Donald P., Hope, Sandra, Grose, Julianne H.
Publicado 2018

Genome Sequences of 19 Novel Erwinia amylovora Bacteriophages

por Esplin, Ian N. D., Berg, Jordan A., Sharma, Ruchira, Allen, Robert C., Arens, Daniel K., Ashcroft, Cody R., Bairett, Shannon R., Beatty, Nolan J., Bickmore, Madeline, Bloomfield, Travis J., Brady, T. Scott, Bybee, Rachel N., Carter, John L., Choi, Minsey C., Duncan, Steven, Fajardo, Christopher P., Foy, Brayden B., Fuhriman, David A., Gibby, Paul D., Grossarth, Savannah E., Harbaugh, Kala, Harris, Natalie, Hilton, Jared A., Hurst, Emily, Hyde, Jonathan R., Ingersoll, Kayleigh, Jacobson, Caitlin M., James, Brady D., Jarvis, Todd M., Jaen-Anieves, Daniella, Jensen, Garrett L., Knabe, Bradley K., Kruger, Jared L., Merrill, Bryan D., Pape, Jenny A., Payne Anderson, Ashley M., Payne, David E., Peck, Malia D., Pollock, Samuel V., Putnam, Micah J., Ransom, Ethan K., Ririe, Devin B., Robinson, David M., Rogers, Spencer L., Russell, Kerri A., Schoenhals, Jonathan E., Shurtleff, Christopher A., Simister, Austin R., Smith, Hunter G., Stephenson, Michael B., Staley, Lyndsay A., Stettler, Jason M., Stratton, Mallorie L., Tateoka, Olivia B., Tatlow, P. J., Taylor, Alexander S., Thompson, Suzanne E., Townsend, Michelle H., Thurgood, Trever L., Usher, Brittian K., Whitley, Kiara V., Ward, Andrew T., Ward, Megan E. H., Webb, Charles J., Wienclaw, Trevor M., Williamson, Taryn L., Wells, Michael J., Wright, Cole K., Breakwell, Donald P., Hope, Sandra, Grose, Julianne H.
Publicado 2017