A proposal for the reference-based annotation of de novo transposable element insertions

por Bergman, Casey M.
Publicado 2012

Horizontal transfer and proliferation of Tsu4 in Saccharomyces paradoxus

por Bergman, Casey M.
Publicado 2018

Testing the palindromic target site model for DNA transposon insertion using the Drosophila melanogaster P-element

por Linheiro, Raquel S., Bergman, Casey M.
Publicado 2008

Whole Genome Resequencing Reveals Natural Target Site Preferences of Transposable Elements in Drosophila melanogaster

por Linheiro, Raquel S., Bergman, Casey M.
Publicado 2012

Photogenic Flies—A review of Chyb and Gompel's Atlas of Drosophila Morphology: Wild-type and Classical Mutants

por Prokop, Andreas, Bergman, Casey M.
Publicado 2013

Strain-specific and pooled genome sequences for populations of Drosophila melanogaster from three continents.

por Bergman, Casey M., Haddrill, Penelope R.
Publicado 2015

Complete Genome Assemblies for Three Variants of the Wolbachia Endosymbiont of Drosophila melanogaster

por Basting, Preston J., Bergman, Casey M.
Publicado 2019

LINNAEUS: A species name identification system for biomedical literature

por Gerner, Martin, Nenadic, Goran, Bergman, Casey M
Publicado 2010

Annotating genes and genomes with DNA sequences extracted from biomedical articles

por Haeussler, Maximilian, Gerner, Martin, Bergman, Casey M.
Publicado 2011

Evolutionary Genomics of Transposable Elements in Saccharomyces cerevisiae

por Carr, Martin, Bensasson, Douda, Bergman, Casey M.
Publicado 2012

REDfly 2.0: an integrated database of cis-regulatory modules and transcription factor binding sites in Drosophila

por Halfon, Marc S., Gallo, Steven M., Bergman, Casey M.
Publicado 2008

McClintock: An Integrated Pipeline for Detecting Transposable Element Insertions in Whole-Genome Shotgun Sequencing Data

por Nelson, Michael G., Linheiro, Raquel S., Bergman, Casey M.
Publicado 2017

Conserved Noncoding Elements Influence the Transposable Element Landscape in Drosophila

por Manee, Manee M, Jackson, John, Bergman, Casey M
Publicado 2018

Long-Read Genome Assembly of Saccharomyces uvarum Strain CBS 7001

por Chen, Jingxuan, Garfinkel, David J., Bergman, Casey M.
Publicado 2022

Recurrent insertion and duplication generate networks of transposable element sequences in the Drosophila melanogaster genome

por Bergman, Casey M, Quesneville, Hadi, Anxolabéhère, Dominique, Ashburner, Michael
Publicado 2006

The Evolution of tRNA Genes in Drosophila

por Rogers, Hubert H., Bergman, Casey M., Griffiths-Jones, Sam
Publicado 2010

BioContext: an integrated text mining system for large-scale extraction and contextualization of biomolecular events

por Gerner, Martin, Sarafraz, Farzaneh, Bergman, Casey M., Nenadic, Goran
Publicado 2012

Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome

por Lipatov, Mikhail, Lenkov, Kapa, Petrov, Dmitri A, Bergman, Casey M
Publicado 2005

An Age-of-Allele Test of Neutrality for Transposable Element Insertions

por Blumenstiel, Justin P., Chen, Xi, He, Miaomiao, Bergman, Casey M.
Publicado 2014

pubmed2ensembl: A Resource for Mining the Biological Literature on Genes

por Baran, Joachim, Gerner, Martin, Haeussler, Maximilian, Nenadic, Goran, Bergman, Casey M.
Publicado 2011