Evaluation of the secondary use of electronic health records to detect seasonal, holiday-related, and rare events related to traumatic injury and poisoning

por Bergquist, Timothy, Pejaver, Vikas, Hammarlund, Noah, Mooney, Sean D., Mooney, Stephen J.
Publicado 2020

Does Frailty influence Inhospital Management and Outcomes of COVID-19 in Older Adults in the US?

por Setoguchi, Soko, Madhira, Vithal, Bergquist, Timothy, Kuhrt, Nathaniel, Islam, Jessica, Spratt, Heidi, Siu, Joseph, Kennedy, Richard
Publicado 2021

Piloting a model-to-data approach to enable predictive analytics in health care through patient mortality prediction

por Bergquist, Timothy, Yan, Yao, Schaffter, Thomas, Yu, Thomas, Pejaver, Vikas, Hammarlund, Noah, Prosser, Justin, Guinney, Justin, Mooney, Sean
Publicado 2020

SARS-CoV-2 infection and COVID-19 severity in individuals with prior seasonal coronavirus infection

por Gombar, Saurabh, Bergquist, Timothy, Pejaver, Vikas, Hammarlund, Noah E., Murugesan, Kanagavel, Mooney, Sean, Shah, Nigam, Pinsky, Benjamin A., Banaei, Niaz
Publicado 2021

Rituximab is associated with worse COVID-19 outcomes in patients with rheumatoid arthritis: A retrospective, nationally sampled cohort study from the U.S. National COVID Cohort Col...

por Singh, Namrata, Madhira, Vithal, Hu, Chen, Olex, Amy L., Bergquist, Timothy, Fitzgerald, Kathryn C., Huling, Jared D., Patel, Rena C., Singh, Jasvinder A.
Publicado 2023

Risk and Outcome of Breakthrough COVID-19 Infections in Vaccinated Patients With Cancer: Real-World Evidence From the National COVID Cohort Collaborative

por Song, Qianqian, Bates, Benjamin, Shao, Yu Raymond, Hsu, Fang-Chi, Liu, Feifan, Madhira, Vithal, Mitra, Amit Kumar, Bergquist, Timothy, Kavuluru, Ramakanth, Li, Xiaochun, Sharafeldin, Noha, Su, Jing, Topaloglu, Umit
Publicado 2022

A Continuously Benchmarked and Crowdsourced Challenge for Rapid Development and Evaluation of Models to Predict COVID-19 Diagnosis and Hospitalization

por Yan, Yao, Schaffter, Thomas, Bergquist, Timothy, Yu, Thomas, Prosser, Justin, Aydin, Zafer, Jabeer, Amhar, Brugere, Ivan, Gao, Jifan, Chen, Guanhua, Causey, Jason, Yao, Yuxin, Bryson, Kevin, Long, Dustin R., Jarvik, Jeffrey G., Lee, Christoph I., Wilcox, Adam, Guinney, Justin, Mooney, Sean
Publicado 2021

A framework for future national pediatric pandemic respiratory disease severity triage: The HHS pediatric COVID-19 data challenge

por Bergquist, Timothy, Wax, Marie, Bennett, Tellen D., Moffitt, Richard A., Gao, Jifan, Chen, Guanhua, Telenti, Amalio, Maher, M. Cyrus, Bartha, Istvan, Walker, Lorne, Orwoll, Benjamin E., Mishra, Meenakshi, Alamgir, Joy, Cragin, Bruce L., Ferguson, Christopher H., Wong, Hui-Hsing, Deslattes Mays, Anne, Misquitta, Leonie, DeMarco, Kerry A., Sciarretta, Kimberly L., Patel, Sandeep A.
Publicado 2023

The Brain Tumor Segmentation (BraTS) Challenge 2023: Brain MR Image Synthesis for Tumor Segmentation (BraSyn)

por Li, Hongwei Bran, Conte, Gian Marco, Anwar, Syed Muhammad, Kofler, Florian, Ezhov, Ivan, van Leemput, Koen, Piraud, Marie, Diaz, Maria, Cole, Byrone, Calabrese, Evan, Rudie, Jeff, Meissen, Felix, Adewole, Maruf, Janas, Anastasia, Kazerooni, Anahita Fathi, LaBella, Dominic, Moawad, Ahmed W., Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russell Takeshi, Dako, Farouk, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Familiar, Ariana, Johanson, Elaine, Meier, Zeke, Davatzikos, Christos, Freymann, John, Kirby, Justin, Bilello, Michel, Fathallah-Shaykh, Hassan M., Wiest, Roland, Kirschke, Jan, Colen, Rivka R., Kotrotsou, Aikaterini, Lamontagne, Pamela, Marcus, Daniel, Milchenko, Mikhail, Nazeri, Arash, Weber, Marc-André, Mahajan, Abhishek, Mohan, Suyash, Mongan, John, Hess, Christopher, Cha, Soonmee, Villanueva-Meyer, Javier, Colak, Errol, Crivellaro, Priscila, Jakab, Andras, Albrecht, Jake, Anazodo, Udunna, Aboian, Mariam, Yu, Thomas, Chung, Verena, Bergquist, Timothy, Eddy, James, Albrecht, Jake, Baid, Ujjwal, Bakas, Spyridon, Linguraru, Marius George, Menze, Bjoern, Iglesias, Juan Eugenio, Wiestler, Benedikt
Publicado 2023

Generalisable long COVID subtypes: Findings from the NIH N3C and RECOVER programmes

por Reese, Justin T., Blau, Hannah, Casiraghi, Elena, Bergquist, Timothy, Loomba, Johanna J., Callahan, Tiffany J., Laraway, Bryan, Antonescu, Corneliu, Coleman, Ben, Gargano, Michael, Wilkins, Kenneth J., Cappelletti, Luca, Fontana, Tommaso, Ammar, Nariman, Antony, Blessy, Murali, T.M., Caufield, J. Harry, Karlebach, Guy, McMurry, Julie A., Williams, Andrew, Moffitt, Richard, Banerjee, Jineta, Solomonides, Anthony E., Davis, Hannah, Kostka, Kristin, Valentini, Giorgio, Sahner, David, Chute, Christopher G., Madlock-Brown, Charisse, Haendel, Melissa A., Robinson, Peter N.
Publicado 2022

Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework

por Glusman, Gustavo, Rose, Peter W., Prlić, Andreas, Dougherty, Jennifer, Duarte, José M., Hoffman, Andrew S., Barton, Geoffrey J., Bendixen, Emøke, Bergquist, Timothy, Bock, Christian, Brunk, Elizabeth, Buljan, Marija, Burley, Stephen K., Cai, Binghuang, Carter, Hannah, Gao, JianJiong, Godzik, Adam, Heuer, Michael, Hicks, Michael, Hrabe, Thomas, Karchin, Rachel, Leman, Julia Koehler, Lane, Lydie, Masica, David L., Mooney, Sean D., Moult, John, Omenn, Gilbert S., Pearl, Frances, Pejaver, Vikas, Reynolds, Sheila M., Rokem, Ariel, Schwede, Torsten, Song, Sicheng, Tilgner, Hagen, Valasatava, Yana, Zhang, Yang, Deutsch, Eric W.
Publicado 2017

The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa)

por Adewole, Maruf, Rudie, Jeffrey D., Gbdamosi, Anu, Toyobo, Oluyemisi, Raymond, Confidence, Zhang, Dong, Omidiji, Olubukola, Akinola, Rachel, Suwaid, Mohammad Abba, Emegoakor, Adaobi, Ojo, Nancy, Aguh, Kenneth, Kalaiwo, Chinasa, Babatunde, Gabriel, Ogunleye, Afolabi, Gbadamosi, Yewande, Iorpagher, Kator, Calabrese, Evan, Aboian, Mariam, Linguraru, Marius, Albrecht, Jake, Wiestler, Benedikt, Kofler, Florian, Janas, Anastasia, LaBella, Dominic, Kzerooni, Anahita Fathi, Li, Hongwei Bran, Iglesias, Juan Eugenio, Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russell Takeshi, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Familiar, Ariana, Van Leemput, Koen, Bukas, Christina, Piraud, Maire, Conte, Gian-Marco, Johansson, Elaine, Meier, Zeke, Menze, Bjoern H, Baid, Ujjwal, Bakas, Spyridon, Dako, Farouk, Fatade, Abiodun, Anazodo, Udunna C
Publicado 2023

Characterizing Long COVID: Deep Phenotype of a Complex Condition

por Deer, Rachel R, Rock, Madeline A, Vasilevsky, Nicole, Carmody, Leigh, Rando, Halie, Anzalone, Alfred J, Basson, Marc D, Bennett, Tellen D, Bergquist, Timothy, Boudreau, Eilis A, Bramante, Carolyn T, Byrd, James Brian, Callahan, Tiffany J, Chan, Lauren E, Chu, Haitao, Chute, Christopher G, Coleman, Ben D, Davis, Hannah E, Gagnier, Joel, Greene, Casey S, Hillegass, William B, Kavuluru, Ramakanth, Kimble, Wesley D, Koraishy, Farrukh M, Köhler, Sebastian, Liang, Chen, Liu, Feifan, Liu, Hongfang, Madhira, Vithal, Madlock-Brown, Charisse R, Matentzoglu, Nicolas, Mazzotti, Diego R, McMurry, Julie A, McNair, Douglas S, Moffitt, Richard A, Monteith, Teshamae S, Parker, Ann M, Perry, Mallory A, Pfaff, Emily, Reese, Justin T, Saltz, Joel, Schuff, Robert A, Solomonides, Anthony E, Solway, Julian, Spratt, Heidi, Stein, Gary S, Sule, Anupam A, Topaloglu, Umit, Vavougios, George D., Wang, Liwei, Haendel, Melissa A, Robinson, Peter N
Publicado 2021

The Brain Tumor Segmentation (BraTS) Challenge 2023: Focus on Pediatrics (CBTN-CONNECT-DIPGR-ASNR-MICCAI BraTS-PEDs)

por Kazerooni, Anahita Fathi, Khalili, Nastaran, Liu, Xinyang, Haldar, Debanjan, Jiang, Zhifan, Anwar, Syed Muhammed, Albrecht, Jake, Adewole, Maruf, Anazodo, Udunna, Anderson, Hannah, Bagheri, Sina, Baid, Ujjwal, Bergquist, Timothy, Borja, Austin J., Calabrese, Evan, Chung, Verena, Conte, Gian-Marco, Dako, Farouk, Eddy, James, Ezhov, Ivan, Familiar, Ariana, Farahani, Keyvan, Haldar, Shuvanjan, Iglesias, Juan Eugenio, Janas, Anastasia, Johansen, Elaine, Jones, Blaise V, Kofler, Florian, LaBella, Dominic, Lai, Hollie Anne, Van Leemput, Koen, Li, Hongwei Bran, Maleki, Nazanin, McAllister, Aaron S, Meier, Zeke, Menze, Bjoern, Moawad, Ahmed W, Nandolia, Khanak K, Pavaine, Julija, Piraud, Marie, Poussaint, Tina, Prabhu, Sanjay P, Reitman, Zachary, Rodriguez, Andres, Rudie, Jeffrey D, Shaikh, Ibraheem Salman, Shah, Lubdha M., Sheth, Nakul, Shinohara, Russel Taki, Tu, Wenxin, Viswanathan, Karthik, Wang, Chunhao, Ware, Jeffrey B, Wiestler, Benedikt, Wiggins, Walter, Anna Zapaishchykova, Aboian, Mariam, Bornhorst, Miriam, de Blank, Peter, Deutsch, Michelle, Fouladi, Maryam, Hoffman, Lindsey, Kann, Benjamin, Lazow, Margot, Mikael, Leonie, Nabavizadeh, Ali, Packer, Roger, Resnick, Adam, Rood, Brian, Vossough, Arastoo, Bakas, Spyridon, Linguraru, Marius George
Publicado 2023

The Brain Tumor Segmentation (BraTS-METS) Challenge 2023: Brain Metastasis Segmentation on Pre-treatment MRI

por Moawad, Ahmed W., Janas, Anastasia, Baid, Ujjwal, Ramakrishnan, Divya, Jekel, Leon, Krantchev, Kiril, Moy, Harrison, Saluja, Rachit, Osenberg, Klara, Wilms, Klara, Kaur, Manpreet, Avesta, Arman, Pedersen, Gabriel Cassinelli, Maleki, Nazanin, Salimi, Mahdi, Merkaj, Sarah, von Reppert, Marc, Tillmans, Niklas, Lost, Jan, Bousabarah, Khaled, Holler, Wolfgang, Lin, MingDe, Westerhoff, Malte, Maresca, Ryan, Link, Katherine E., Tahon, Nourel hoda, Marcus, Daniel, Sotiras, Aristeidis, LaMontagne, Pamela, Chakrabarty, Strajit, Teytelboym, Oleg, Youssef, Ayda, Nada, Ayaman, Velichko, Yuri S., Gennaro, Nicolo, Cramer, Justin, Johnson, Derek R., Kwan, Benjamin Y.M., Petrovic, Boyan, Patro, Satya N., Wu, Lei, So, Tiffany, Thompson, Gerry, Kam, Anthony, Perez-Carrillo, Gloria Guzman, Lall, Neil, Albrecht, Jake, Anazodo, Udunna, Lingaru, Marius George, Menze, Bjoern H, Wiestler, Benedikt, Adewole, Maruf, Anwar, Syed Muhammad, Labella, Dominic, Li, Hongwei Bran, Iglesias, Juan Eugenio, Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russel Takeshi, Dako, Farouk, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Van Leemput, Koen, Piraud, Marie, Ezhov, Ivan, Johanson, Elaine, Meier, Zeke, Familiar, Ariana, Kazerooni, Anahita Fathi, Kofler, Florian, Calabrese, Evan, Aneja, Sanjay, Chiang, Veronica, Ikuta, Ichiro, Shafique, Umber, Memon, Fatima, Conte, Gian Marco, Bakas, Spyridon, Rudie, Jeffrey, Aboian, Mariam
Publicado 2023

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

por Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R., Lee, Alexandra J., Kacsoh, Balint Z., Crocker, Alex W., Lewis, Kimberley A., Georghiou, George, Nguyen, Huy N., Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S., Dalkıran, Alperen, Cetin Atalay, Rengul, Zhang, Chengxin, Hurto, Rebecca L., Freddolino, Peter L., Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernández, José M., Gemovic, Branislava, Perovic, Vladimir R., Davidović, Radoslav S., Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin, Mofrad, Mohammad R.K., Profiti, Giuseppe, Savojardo, Castrense, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Kahanda, Indika, Thurlby, Natalie, McHardy, Alice C., Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex A., Antczak, Magdalena, Fabris, Fabio, Wass, Mark N., Hou, Jie, Cheng, Jianlin, Wang, Zheng, Romero, Alfonso E., Paccanaro, Alberto, Yang, Haixuan, Goldberg, Tatyana, Zhao, Chenguang, Holm, Liisa, Törönen, Petri, Medlar, Alan J., Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Chi, Po-Han, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter W., Dessimoz, Christophe, Vidulin, Vedrana, Dzeroski, Saso, Sillitoe, Ian, Das, Sayoni, Lees, Jonathan Gill, Jones, David T., Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Warwick Vesztrocy, Alex, Rodriguez, Jose Manuel, Tress, Michael L., Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel B., Reeb, Jonas, Ritchie, David W., Aridhi, Sabeur, Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Koo, Da Chen Emily, Bonneau, Richard, Gligorijević, Vladimir, Barot, Meet, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico, Falda, Marco, Berselli, Michele, Tosatto, Silvio C.E., Carraro, Marco, Piovesan, Damiano, Ur Rehman, Hafeez, Mao, Qizhong, Zhang, Shanshan, Vucetic, Slobodan, Black, Gage S., Jo, Dane, Suh, Erica, Dayton, Jonathan B., Larsen, Dallas J., Omdahl, Ashton R., McGuffin, Liam J., Brackenridge, Danielle A., Babbitt, Patricia C., Yunes, Jeffrey M., Fontana, Paolo, Zhang, Feng, Zhu, Shanfeng, You, Ronghui, Zhang, Zihan, Dai, Suyang, Yao, Shuwei, Tian, Weidong, Cao, Renzhi, Chandler, Caleb, Amezola, Miguel, Johnson, Devon, Chang, Jia-Ming, Liao, Wen-Hung, Liu, Yi-Wei, Pascarelli, Stefano, Frank, Yotam, Hoehndorf, Robert, Kulmanov, Maxat, Boudellioua, Imane, Politano, Gianfranco, Di Carlo, Stefano, Benso, Alfredo, Hakala, Kai, Ginter, Filip, Mehryary, Farrokh, Kaewphan, Suwisa, Björne, Jari, Moen, Hans, Tolvanen, Martti E.E., Salakoski, Tapio, Kihara, Daisuke, Jain, Aashish, Šmuc, Tomislav, Altenhoff, Adrian, Ben-Hur, Asa, Rost, Burkhard, Brenner, Steven E., Orengo, Christine A., Jeffery, Constance J., Bosco, Giovanni, Hogan, Deborah A., Martin, Maria J., O’Donovan, Claire, Mooney, Sean D., Greene, Casey S., Radivojac, Predrag, Friedberg, Iddo
Publicado 2019