RNA Accessibility in cubic time

por Bernhart, Stephan H, Mückstein, Ullrike, Hofacker, Ivo L
Publicado 2011

DIEGO: detection of differential alternative splicing using Aitchison’s geometry

por Doose, Gero, Bernhart, Stephan H, Wagener, Rabea, Hoffmann, Steve
Publicado 2018

Strategies for measuring evolutionary conservation of RNA secondary structures

por Gruber, Andreas R, Bernhart, Stephan H, Hofacker, Ivo L, Washietl, Stefan
Publicado 2008

The DREAM complex through its subunit Lin37 cooperates with Rb to initiate quiescence

por Mages, Christina FS, Wintsche, Axel, Bernhart, Stephan H, Müller, Gerd A
Publicado 2017

PB1768: MICRORNA SIGNATURES IMPLY A ROLE FOR FOXO IN AML CHEMO-RESISTANCE

por Reichelt, Paula, Bernhart, Stephan, Schwind, Sebanstian, Behre, Gerhard, Platzbecker, Uwe, Cross, Michael
Publicado 2023

The Vienna RNA Websuite

por Gruber, Andreas R., Lorenz, Ronny, Bernhart, Stephan H., Neuböck, Richard, Hofacker, Ivo L.
Publicado 2008

RNAalifold: improved consensus structure prediction for RNA alignments

por Bernhart, Stephan H, Hofacker, Ivo L, Will, Sebastian, Gruber, Andreas R, Stadler, Peter F
Publicado 2008

A folding algorithm for extended RNA secondary structures

por zu Siederdissen, Christian Höner, Bernhart, Stephan H., Stadler, Peter F., Hofacker, Ivo L.
Publicado 2011

A (GCC) repeat in SBF1 reveals a novel biological phenomenon in human and links to late onset neurocognitive disorder

por Khamse, Safoura, Alizadeh, Samira, Bernhart, Stephan H., Afshar, Hossein, Delbari, Ahmad, Ohadi, Mina
Publicado 2022

MicroRNA Expression Patterns Reveal a Role of the TGF-β Family Signaling in AML Chemo-Resistance

por Reichelt, Paula, Bernhart, Stephan, Wilke, Franziska, Schwind, Sebastian, Cross, Michael, Platzbecker, Uwe, Behre, Gerhard
Publicado 2023

metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data

por Jühling, Frank, Kretzmer, Helene, Bernhart, Stephan H., Otto, Christian, Stadler, Peter F., Hoffmann, Steve
Publicado 2016

Partition function and base pairing probabilities of RNA heterodimers

por Bernhart, Stephan H, Tafer, Hakim, Mückstein, Ulrike, Flamm, Christoph, Stadler, Peter F, Hofacker, Ivo L
Publicado 2006

Deletion analysis of the 3′ long terminal repeat sequence of plant retrotransposon Tto1 identifies 125 base pairs redundancy as sufficient for first strand transfer

por Tramontano, Andrea, Donath, Alexander, Bernhart, Stephan H., Reiche, Kristin, Böhmdorfer, Gudrun, Stadler, Peter F., Bachmair, Andreas
Publicado 2011

Noncoding RNA Transcripts during Differentiation of Induced Pluripotent Stem Cells into Hepatocytes

por Skrzypczyk, Aniela, Kehr, Stephanie, Krystel, Ilona, Bernhart, Stephan H., Giri, Shibashish, Bader, Augustinus, Stadler, Peter F.
Publicado 2018

The Evolving Faces of the SARS-CoV-2 Genome

por Schmidt, Maria, Arshad, Mamoona, Bernhart, Stephan H., Hakobyan, Siras, Arakelyan, Arsen, Loeffler-Wirth, Henry, Binder, Hans
Publicado 2021

RNPomics: Defining the ncRNA transcriptome by cDNA library generation from ribonucleo-protein particles

por Rederstorff, Mathieu, Bernhart, Stephan H., Tanzer, Andrea, Zywicki, Marek, Perfler, Katrin, Lukasser, Melanie, Hofacker, Ivo L., Hüttenhofer, Alexander
Publicado 2010

Splicing Endonuclease Is an Important Player in rRNA and tRNA Maturation in Archaea

por Schwarz, Thandi S., Berkemer, Sarah J., Bernhart, Stephan H., Weiß, Matthias, Ferreira-Cerca, Sébastien, Stadler, Peter F., Marchfelder, Anita
Publicado 2020

MCPIP1 ribonuclease can bind and cleave AURKA mRNA in MYCN-amplified neuroblastoma cells

por Nowak, Iwona, Boratyn, Elżbieta, Student, Sebastian, Bernhart, Stephan F., Fallmann, Jörg, Durbas, Małgorzata, Stadler, Peter F., Rokita, Hanna
Publicado 2020

ViennaRNA Package 2.0

por Lorenz, Ronny, Bernhart, Stephan H, Höner zu Siederdissen, Christian, Tafer, Hakim, Flamm, Christoph, Stadler, Peter F, Hofacker, Ivo L
Publicado 2011

Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes

por Donath, Alexander, Jühling, Frank, Al-Arab, Marwa, Bernhart, Stephan H, Reinhardt, Franziska, Stadler, Peter F, Middendorf, Martin, Bernt, Matthias
Publicado 2019